Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1957 ATGTGTAGTATGTGCCGTTATTGTGGTGTGGGCTTGTCAGAATCAAATTTTGACAACAAGAAACAGGGAAATGAGAGTAGTCTAAAGTTGAATGGTAAAGTTTCCATTAGGCCTTGCAAATCTTGTGGAGAGAAGCTAGAGCGAGCAAATGCGAAATGGCATAGTACAAGTCCTTATGCAACACCACTTATCAGTCCAACTACGTCATTGCTAAGTACTGATAGCTGTGTCTCCACTTGCAGTGAGTTTTCAGTTGATGTGAACTCATGTGATAGGAATAGTCAAGAAGAAAGTTCAGTTGAAGGTGTTGTGGAAGAGCTTGATTATAAGTTGAATGGTTCACCAAAAGTGATGGAAAACAATAACAACAATGAGGGTTACACAGTGAGAGATGTGGAGATTGCACAAGGACATAACTTTCAAGAAGTAAAAGCTGATTTTTCTGAAGAACCTACTGCATCCTCTGCTGCTGAAGAAGCTGAATATTCTCTTCCTGATGATTTGGATGTCCAAACTTGGGAACCTCCTGAGCCAGAAAACCCACAGGATGATATGGAAAATAGTGTGACTTGTAATGACGACGATGAAGACCAGGGCCTAGGGATTGCAAACTGGGGTGAGCCTACCTCTATGAGTAGTTCTGAGAATGAATTAAGTGGGAGCTATAGGTTCAAAGAGGAAAAACAAAGAGCAATGGAAGAAGTAATGAATGGGAAATTCAAGGCACTTGTTGGTCAGCTTCTTAAATCTGTGGGAGTTTCCTCTTCTGATCAATGTGATAAGAGTTGGGTGGACATAGTTACATCTTTATCATGGGAAGCTGCTTCTTTTTTGAAGCCTGGTGCCATTGGAGCTAATGCAATGAATCCTGATGGATATGTTAAAGTGAAGTGCATTGCTGCTGGTTCCCGCAGCGAAAGTCAACTGATCAGAGGTTTGGTCTTCAAAAAACATGCTGCTCACAAGCATATGCCTACTAAGTATAAAAATCCAAGATTATTACTGATCAGCGGTGTGCTTGGCCATTCTATCAATGGGCTGTCCTCATTTGACTCCATGGACCAGGAGAAAGATGATCTGAAATCTAAAATGGATCGTATAGAAATGTGTCATCCAAATGTTATATTAGTGGAGAAAACTGTTTCTCGTGATATACAAGAGTCAATTTTGGCAAAGGGAATGACACTTGTGCTTGATATGAAGCTTCATCGTCTAGAAAGAGTTGCATGTTGTACTGGTTCACCAATTTTATCATGCGATAATTTGAACGGTCAAAAGCTAAGACACTGTGACTTTATCTATTTTGAGAAGTTTGTGGAGGAACATGATGCTGTTGGTGAAGGAGGAAAGAAGCCCATCAAGACTTTGATGTTCATTGAGGGCTGTCCTACACGTTTGGGCTGCACGATTTTACTGAAAGGTACACACAGTGATGAACTGAAGAGGATCAAATGTGTCATGCGGTGTGCAGTTGTCATGGCATATCATTTAATCCTTGAAACCTCCTTTCTTGTTGATCAGAAAGCAATGTTCTCTACCATTCCTGCTGTGAGTGTAGCAGATATCTTGCCAACTGATAAAAAATCCTGTGATTTAGCATCCACTAATTCAAGCATTCCATCTCTTGAGTATTCTGCTGAGAATGGAATAGTTAGTACTGATATTCCCATATGCAATGGACTTCATGAAAACAACATCAATGGTTTAAACCTAGGATCAGAGGAGTTTTCTCCATTCTCTTGTGAACCATATAATCCAGCCGTATTTTCTGGGTTCTCAGCTATTTCATCTTCTCTTAAAAAGGTTATGGGGGACAGTTTTCCCTTTGCATCTTCTGCTCCTTATCAATCTTTATCAGCTTACTTTGGCTTCAATGGAAGGAAACCTGACGGTCAGGTTAATGAGTCGATTTCTGTTTTAAACTCTCTGGAGGCTGATGAAAATACCATGATGGAAGCAAAAAGTCATTCTAATGAAGTGAAGTTACTTAATGGTGGACAATCCCTGTCTTCACCTGTGCATTTAGATTCCAATGGGGATATAAGTAAATATGATGAAAATAATAGAAAAGAACTCCAACGTAAAGAGGATATCAATGCAGTGTTGGATTCTCAGAGTATTTTGGTCTTGATGTCTAGATGGAATGCCTTAAGAGGGACTGTATGCCAGCAAAGTCATTTTTCACATATTATGTTCTACAAGAATTTTGATATTCCACTTGGAAAATTTCTGGAGGATAACTTACTCAATCAGACAAGACTTTGTGATGCCTGTCAAGAATTGCCAGATGCCCACTTTTATTATTATGCTCATCACAGTAAGCAGCTTACTATCCAAGTTAAATGCTTGCCCCAGGAAAAAAGTTTGCCTGGGGAGGCAGAAGGGAAAATTTGGATGTGGAGCCGTTGTCGAAAATGCAAGTCTGGTTCTACAAAGAGAGTGCTGATATCCACCACTGCCCGTAGTTTATCATTTGGAAAATTTTTGGAGCTCAGCCTTTCTTACTATTCTTCTAGCAGAAAATTGAGTTGTGGACATTCTCTTGATAGGGATTTTCTCTATTTCTTTGGATTAGGTCACATGGTTGCAATGTTCAGATATTCTTCTGTTGCCACATATTCTGTGTGTATGCCTCCTCGAAAGCTGGAGTTCTGTGGTGCAATAAGACAAGAGTGGCTTTTGAAAGAGACTCAGAATGTGTATATGAAAGGCATAACATTATTCACCGAAGTTGCAAACTGTTTGAAGACAATACAATTTGATGGCCTTGGAGGATCAATTAGAGATTTGTCTGAAGTTGAGAAGATGTTCAAGCAAGAGCAAGAAGAATTCGAGGCAAACATCAAGACTGCTGTTGCTAAAAAAGGGGATCCAGACCAGGCTGCCTTCAAACTTCTCAGTTTAAACCGATTGATGTGGGATCTTTTGCTTCAATCCTATGTGTGGGTCCGGCGCTTGTACCCATTACACTCACCTGATGGTTTAAGACTTGAATCTGATGTCTCTGAGAAAGTTATGCATGAACATGATTATTCAAAGGTGGAAGGTATTGCTAGTAGAGAAACTGGGTCTATGGGTAATTTTATGGAAGATGGGGATGCCAATGTAAAAATTATGTTTGGCTCATCTGTGCAAGTAAATGAACTACCGATAAAGGAAATTCCTATCAGTGGACCTTTTCTAGAGTGCAATGAACTGGCTGATCCATCTAACGCACAGAATGAGAGGATACCGATTGTTGATGATTTGAGATCAAGAAGATCTTCTGACCAAAACTTGAATTTGAGTCTGGATGTTATACCAACTCATCTTGAAGTAGGTGAAAACTCTCCAGTTTCTACAGATATTCAAACTAATCATTTGGTTGCTGATTTAAAGGTATTAAACAAAATTTCTTCCTTTCATTCACCAATTTCCAACATGCTGGATTCAAATGATTGGTTCTGGAAGCCATTTGCTGACATTCGACAGATAGGCATAAAGGAATTCCAGAAAAGATTATTGCCAAAATTTGAATTTGTAAGCAGCTCTATTGCTGAATATATACCCACAGCCCATCAATTAATCACTGAGGAAGGTACAAGGTTGCATATCCCTCTCAAGACTGACAATCATGTTGTGTCTGACTTCGAGGGTGAACCCTCAAGCATAATTGCTTGTGCACTGGCCTTATTGAAAGATGCATATGAGGTGTCAGAAATTGATGATGAGGATGAGAGAAACGAAAGTGGAATAACTTCAAACTCAACAGAATGTTTGCATGGCTTGACCAATGGTGCTGCCTTAACTTCTTCACACTCATTTTCAAGAAGTTCTTCAGATTCAGATTCTGTGCATTCTGCAGGAAGCACTTCTTCAGAAGAGTCACGAGCCTCTCGTGCTACAGAAAACCATAGCATAGAGATTGCTATGGGTTATGCTAAATCACTTGGGAGGGAAAAATATTCAGTGATATGTCATTATTTTAAGCAGTTCCGTGAACTTAGAAATTGGTGTTGCCTATCTGAGCTTGATTTTATTGCTTCTTTAAGCCGCTGTAGGAATTGGGATGCCAAAGGTGGAAAAAGCAAGTCCTATTTTGCAAAAACACTTGATGACAGATTCATCATAAAGGAGATTAAGAAGACAGAACTTGATTCATTTTTGGGGTTTTCTTCTCTGTATTTCAAACACATGAGAGAATCATTTGAGTCTGGCAGCCAAACTTGTCTTGCAAAAGTCTTGGGGATATATCAGGTTACTAAAAGACACGTTAAAAGTGGAAAAGAGGTTAAATATGACCCCCTCATGGTGATGGAAAATCTTACCTACAATAGAAATATTACTCGCCAGTATGATCTTAAAGGTGCTCTTTATGCCCGGTACAATTCTGCTGCTGATGGAGCTGGAGATGTTCTGTTGGATCAGAACTTTGTGAATGACATGAACTCGTCCCCATTATATGTCAGTCTTAAAGCAAAGCGTTATCTTCAACGTGCTGTTTGGAATGACACATCTTTTCTGAATTCTATCAATGTGATGGATTACTCCTTGCTTGTTGGAGTAGATTCTCAGAAGAGCGAGCTTGTCTGTGGGATCATTGATTATCTCAGGCAGTATACATGGGATAAACATCTTGAGACATGGATGAAGTCTTCACTTGTTGTGCCAAAAAATGTGTTGCCGACTGTAATATCTCCTAAAGAATACAAAAAGAGGTTCAGAAAGTTTATGTCTACATATTTTTTGAGTGTTCCAGATCACTGGTGTTCCCAGAAATCCTCCAATCCTTGCAAACTTTGTGGCTCAGGGGAAGATGACCCTTCTCAGCAAAAGCCCTAG 4821 0.396 MCSMCRYCGVGLSESNFDNKKQGNESSLKLNGKVSIRPCKSCGEKLERANAKWHSTSPYATPLISPTTSLLSTDSCVSTCSEFSVDVNSCDRNSQEESSVEGVVEELDYKLNGSPKVMENNNNNEGYTVRDVEIAQGHNFQEVKADFSEEPTASSAAEEAEYSLPDDLDVQTWEPPEPENPQDDMENSVTCNDDDEDQGLGIANWGEPTSMSSSENELSGSYRFKEEKQRAMEEVMNGKFKALVGQLLKSVGVSSSDQCDKSWVDIVTSLSWEAASFLKPGAIGANAMNPDGYVKVKCIAAGSRSESQLIRGLVFKKHAAHKHMPTKYKNPRLLLISGVLGHSINGLSSFDSMDQEKDDLKSKMDRIEMCHPNVILVEKTVSRDIQESILAKGMTLVLDMKLHRLERVACCTGSPILSCDNLNGQKLRHCDFIYFEKFVEEHDAVGEGGKKPIKTLMFIEGCPTRLGCTILLKGTHSDELKRIKCVMRCAVVMAYHLILETSFLVDQKAMFSTIPAVSVADILPTDKKSCDLASTNSSIPSLEYSAENGIVSTDIPICNGLHENNINGLNLGSEEFSPFSCEPYNPAVFSGFSAISSSLKKVMGDSFPFASSAPYQSLSAYFGFNGRKPDGQVNESISVLNSLEADENTMMEAKSHSNEVKLLNGGQSLSSPVHLDSNGDISKYDENNRKELQRKEDINAVLDSQSILVLMSRWNALRGTVCQQSHFSHIMFYKNFDIPLGKFLEDNLLNQTRLCDACQELPDAHFYYYAHHSKQLTIQVKCLPQEKSLPGEAEGKIWMWSRCRKCKSGSTKRVLISTTARSLSFGKFLELSLSYYSSSRKLSCGHSLDRDFLYFFGLGHMVAMFRYSSVATYSVCMPPRKLEFCGAIRQEWLLKETQNVYMKGITLFTEVANCLKTIQFDGLGGSIRDLSEVEKMFKQEQEEFEANIKTAVAKKGDPDQAAFKLLSLNRLMWDLLLQSYVWVRRLYPLHSPDGLRLESDVSEKVMHEHDYSKVEGIASRETGSMGNFMEDGDANVKIMFGSSVQVNELPIKEIPISGPFLECNELADPSNAQNERIPIVDDLRSRRSSDQNLNLSLDVIPTHLEVGENSPVSTDIQTNHLVADLKVLNKISSFHSPISNMLDSNDWFWKPFADIRQIGIKEFQKRLLPKFEFVSSSIAEYIPTAHQLITEEGTRLHIPLKTDNHVVSDFEGEPSSIIACALALLKDAYEVSEIDDEDERNESGITSNSTECLHGLTNGAALTSSHSFSRSSSDSDSVHSAGSTSSEESRASRATENHSIEIAMGYAKSLGREKYSVICHYFKQFRELRNWCCLSELDFIASLSRCRNWDAKGGKSKSYFAKTLDDRFIIKEIKKTELDSFLGFSSLYFKHMRESFESGSQTCLAKVLGIYQVTKRHVKSGKEVKYDPLMVMENLTYNRNITRQYDLKGALYARYNSAADGAGDVLLDQNFVNDMNSSPLYVSLKAKRYLQRAVWNDTSFLNSINVMDYSLLVGVDSQKSELVCGIIDYLRQYTWDKHLETWMKSSLVVPKNVLPTVISPKEYKKRFRKFMSTYFLSVPDHWCSQKSSNPCKLCGSGEDDPSQQKP* 1607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1957 1606 SMART PIPK_2 1290 1576 IPR002498 GO:0016307|GO:0046488
Gso10g1957 1606 Pfam TCP-1/cpn60 chaperonin family 245 499 IPR002423 GO:0005524
Gso10g1957 1606 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 161 1603 - -
Gso10g1957 1606 CDD Fab1_TCP 241 507 - -
Gso10g1957 1606 MobiDBLite consensus disorder prediction 1264 1294 - -
Gso10g1957 1606 Gene3D GroEL 305 474 IPR027409 -
Gso10g1957 1606 MobiDBLite consensus disorder prediction 147 220 - -
Gso10g1957 1606 Gene3D - 1435 1576 - -
Gso10g1957 1606 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED 161 1603 - -
Gso10g1957 1606 SUPERFAMILY GroEL apical domain-like 306 474 IPR027409 -
Gso10g1957 1606 MobiDBLite consensus disorder prediction 1264 1290 - -
Gso10g1957 1606 CDD PIPKc_PIKfyve 1314 1575 IPR044769 GO:0000285
Gso10g1957 1606 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1254 1575 IPR002498 GO:0016307|GO:0046488
Gso10g1957 1606 SUPERFAMILY SAICAR synthase-like 1313 1575 - -
Gso10g1957 1606 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1520 1573 IPR002498 GO:0016307|GO:0046488
Gso10g1957 1606 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1352 1519 IPR002498 GO:0016307|GO:0046488
Gso10g1957 1606 MobiDBLite consensus disorder prediction 205 219 - -
Gso10g1957 1606 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1249 1434 IPR027484 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1957 Gso-Chr10 46566302 46576639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1957 324 1588 Acyl Lipid Metabolism Gene Families AT1G34260 47.186 0.0 1073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1957 K00921 - gmx:100815340 3154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g1957 10 46566302 46576639 Gso10g1957 10 46566302 46576639 ECH
Gso20g1398 20 44157716 44168157 Gso10g1957 10 46566302 46576639 GST