Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1362 ATGAGGACAGGGTCTTTGATTTTTTCCTTATTGCAAGTACCCAGATGCAAAATACACAGCTTAGCTAATTATGGGGAAGAAGCATTACACGGTTTCAGTAAGGCTTATGGAAACAACAATTCTAGCATCAGGCTACTTGGTCCTAGAATTTATGGTCTTGAGAGAGGACTCAATACTAAGTTGATTCAAAGACTTATAGCTACAAGAGCTGAAGGAAGTAAACAAACCACTTGTAACACCAAATCAAAAATTAACAAGGATGAAATTTTAGCAAGTGCTACTGCGAAAGTAAATAGAACACGGCTAGATCAGTCGCAGAAAATTCTGTACCCGGATGTGCAAGAGATTGCTCAGTATGAAAACTTATCTGATCTGGTTACTATTATTGTTTTTGATCTTGAGACTACAGGGTATAGCAAAGTAAACGACCGGATCATTGAGATTGCTCTTCGAGATCTCAAGGGTGGTGAGAACAGCACTTTTCAAACTCTTGTAAATCCTCAATGTCATGTTCCTAATTCACGTATTCATGGAATTTCTACGAAGATGGTGAACATACCTGATGTTCCAAGGATGGAAGACCTGATTCCCATATTGTTGCAGTACATTAAAAGCCGTGAGAAACAAGGAGGATATGTGTTATGGATTGCTCACAATGGTCGTGCTTTTGATGCACCTTTCCTCATCCATGAGTTCTTCCGTTGTTGTGCTGAGCTTCCTCGGAACTCGCTGTTTCTGGACACCCTTCCTTTGGGACGTGAACTGATCAAGTCTGAAGGAAGAAACCTTTCTTCAGCATCTCTTGTTGCCCTTCGGGAGTTCTACAAAGTTAAAGTGGATGGATCAGCTCACAGAGCCATGGTAGATGTGAACACATTGTCTCAGATACTTCCAATGTTGACCTATGATCTGAAGCTGACCTTATCTGACCTCATCCGAAAATCATTAAACATTTCGGATTTGATAAACGCTAAGAAAACGAAGAAGAATTCATACTAG 999 0.4024 MRTGSLIFSLLQVPRCKIHSLANYGEEALHGFSKAYGNNNSSIRLLGPRIYGLERGLNTKLIQRLIATRAEGSKQTTCNTKSKINKDEILASATAKVNRTRLDQSQKILYPDVQEIAQYENLSDLVTIIVFDLETTGYSKVNDRIIEIALRDLKGGENSTFQTLVNPQCHVPNSRIHGISTKMVNIPDVPRMEDLIPILLQYIKSREKQGGYVLWIAHNGRAFDAPFLIHEFFRCCAELPRNSLFLDTLPLGRELIKSEGRNLSSASLVALREFYKVKVDGSAHRAMVDVNTLSQILPMLTYDLKLTLSDLIRKSLNISDLINAKKTKKNSY* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1362 332 PANTHER POLYMERASE III POLC-TYPE, PUTATIVE ISOFORM 1-RELATED 3 331 - -
Gso10g1362 332 SUPERFAMILY Ribonuclease H-like 127 301 IPR012337 -
Gso10g1362 332 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 3 331 IPR040393 GO:0008408
Gso10g1362 332 CDD DEDDh 129 297 - -
Gso10g1362 332 Pfam Exonuclease 129 296 IPR013520 -
Gso10g1362 332 SMART exoiiiendus 127 306 IPR013520 -
Gso10g1362 332 Gene3D - 126 310 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1362 Gso-Chr10 40032190 40035780 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1362 - - gmx:100807138 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1939 19 48072163 48076376 Gso10g1362 10 40032190 40035780 PCT
Gso3g1979 3 45290616 45294992 Gso10g1362 10 40032190 40035780 PCT
Gso10g1362 10 40032190 40035780 Gso19g1939 19 48072163 48076376 PCT
Gso10g1362 10 40032190 40035780 Gso3g1979 3 45290616 45294992 PCT