Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0650 ATGTCAACCACCATTGATGTCCCAGAATCAAACAATGTTGCTAAAGAAAAAGTACTTTTATTAGGTGCACGTCCAAGGCCAGGAGGGTGGAAGAAAGGTGTAGCAATAATGGACTTTATTCTAAGGTTAGGTGCCATAGCAGCTGCTCTTGGTGCTGCTGCCACTATGGGAACCAGTGATCAAACACTCCCTTTCTTCACTCAGTTCTTTCAGTTTGAAGCAAGTTATGATAGCTTCACTACTTTTCAGTTTTTTGTTATTACAATGGCACTTGTGGCTGGCTATCTTGTCCTGTCGCTACCTTTCTCTATAGTAGTCATCATACGCCCTCATGCAGTTGGACCAAGGCTTTTTCTCATCATCTTAGACACAGTGTTTCTGACTTTGGCCACCGCTAGTGGTGCTTCAGCTGCTGCCATCGTTTACTTGGCACACAACGGGAATCAAGACTCGAACTGGCTTGCTATCTGCAACCAATTTGGAGATTTTTGCGCGCAAACAAGTGGAGCAGTGGTTTCATCCTTGGTTTCCGTGGTTATTTTTGTGTTGCTCATTGTTATGTCTGCTTTGGCACTTAGAAGAAATTAA 588 0.4354 MSTTIDVPESNNVAKEKVLLLGARPRPGGWKKGVAIMDFILRLGAIAAALGAAATMGTSDQTLPFFTQFFQFEASYDSFTTFQFFVITMALVAGYLVLSLPFSIVVIIRPHAVGPRLFLIILDTVFLTLATASGASAAAIVYLAHNGNQDSNWLAICNQFGDFCAQTSGAVVSSLVSVVIFVLLIVMSALALRRN* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0650 195 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 10 194 - -
Gso10g0650 195 Pfam Casparian strip membrane protein domain 32 179 IPR006702 -
Gso10g0650 195 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 39 191 IPR006459 -
Gso10g0650 195 PANTHER CASP-LIKE PROTEIN 10 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0650 Gso-Chr10 7900581 7902266 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0650 - - gmx:100500387 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1550 3 41427073 41429799 Gso10g0650 10 7900581 7902266 PCT