Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0571 ATGGAGGTTGGGGAAATGGACAGAAAGGAGACACAAGTTGAGGTTCCTTGGAGCCCCGGCCCACCTATTAAGCCAGTTCCTATGAAACCAGTGCCGATCTACATGCCTGAGGAGAGAAACCAAATGGATCATCTTGCAAATGGAGCAGTTGCATGTGCTGAATTTTCACTTGGCCAAGACAAAATTGGTGGGTCAGGTGATGGGTCAAATGTTGCCGGTTACAGTGGCAAAACTTGTGAACAGATAGTTTCGGATGCTGTTTCCAGCTACAGAAAACTTGGGTTCTGTGAGCAACTGTTGGCGGTTGAAGCTGAATCGAGGAACATCAGTGTGACACAAGGGAATAATGATGGATTGAAGAATCCGTTTGTTCCTCCACTCGTCCTTGATAATGTCCTAGACCCTCAGGAAACATACATTGCTTGCTGTAGCATGAAATCTTCACAGGATACCTCATATATACTTGACAATGCCAACAAAGAAGAAAGCAGACAAATAGCATCAATGCAAGTCAATATGGAAGAAAAGGATCCAGGAAGGGAAGAGAGAAATGTCACTGCCAATAAGCTTGACAATAATGTAGCGCCAAACAGCAAAGAACTCTGTGACCCTGCCATGGAATTTGCTGCTGTTTCTTCACCAGTGAAGGAGAATCACAACCCAGATAATGGAAGCAGTCATGATACTGATCTTAATAAAACACCACAACAAAAACCAAGGAGAAGAAAGCACCGTCCCAAGGTCATCAAAGAAGGCAAACCCAAAAGAACTCGGAAGCCAGCTACCCCAAAGCCTGTTCAATCAAAAGAAAAGCAACCTGTCAAGAGGAAGTATGTGAGAAAGAATGCACTGAACAAGACTTCTACTCCTCCAACAGAAGAGACTGGGGAATTGACTAAAGAAATGTCTTGTAAAAGGTCCTTAAATTTCGACATAGGAACAACATATGAAAGTTCTGCTGCCATAGAAAATACAAGAACGCTATTGGGAAAAGAAAATGGTGTTCTTGTACAAGAAACAAATGTAGGTCCTGCATTTGATCTAAACACTTCCATGAAGCAGGCATCAAACAGTTACATGTCACTACCAGAAGACACACAAGCCCTAAATACATCTTCGGGAAGAAAAAGCTCAGGGACAAAGCCAGAGGAAAACCCACCTCCGAAGAGGAAGTATGTGAAAAGGAAAGGAGTGAACAAGACTTCTGCTCCTCCAATAGAAGTTCCTGGAAATTTGACTGAAGAAACAACGTCTGCATCTGCCCAAACATCATGCACAGGGTCCATAAATTTTGATGAAAGAGCAAGTGAACAAAGTTATGCAGTCAAAGAGAATCCAACTGGGCATCCAGGCAGTGAAATTGGTGTAGTAATGAAGGAAATGAATGTGGGCCTTGCCTATGATTTAAACACTTCCATGAAGCAGGCATTAAATGATGACATGACATTACCTAAGGACACACAAGCCCCAAGTTCATCTTCAAAAATCAAACTCCCGGGGACAAAGAGAAAAGAAAACTTGACTGGCAAGAGGAAGAATGCGAGGAAAAAAGGATCGAATCCGTCTCCTATTCCTCCAACAGAAATGACAGAATTGACTGAAGCAATGATACTTGAATCTAACATGTCATGGAGAAGATCCTTAAATTTTGATATCGGAAATGTAGGCAGAGAAAATTTAGATTTGGACATTGGGAAGGAAAATATGGTGTTGGAGGAAAGAAAAGTAGGTCCCACCTATAAAGACACTTGGTTGAAAGAGGCAGTAAATATTTGCATGTCATTACCTGAGGAAACCCAACACCCAAGTACGTCTATTTCAAAATGCACTTCCCCTGGGGCAAAGCTGAATGCCAACTCTGTAGAGAAAAAAAACAAAAAAGGCCGGGCAACTGCTTGGGGTGGAAACATAAGTAATAGTCAAAGTTCATCAATAAGGTTACAAATGGTTGGCTCAAAGAGAAAACATTCTGATACCTTTAATCGTGCAGATGACAGCAGCATGAATCTGATTGGAGTGCAATATAATGGACTGCCCTCATACCAACACCTAAGTACGTCTATTTCAAAATGCACTTCCCCTGGGGCAAAGCTGAATGCCAACTCTGTAGAGAAGAAAAACAAAAAAATCCGGGCAACTGCTCGGGGTGGAAACATCAGTAATAGTCAAAGTTCATCAATAGGGTTACAAATGGTTGGTTCAAAGAGAAAACATTCTGGTACCTTTAATCGTGCAGATGACAGCAGCTTGAATCTGATTGGAGTGCAATATAATGGACTGCCCTCATACCACACTAGCCTTTGCCTTCAGTTTCCAAAAATACAGAAGAAAAGGAGAACCGAAAAGGGGAATGCAACAAAAGAAGTCCAACTGACATGCCCTCAGGAAGATGCTCTAGGACATCCATATGCATCAAGCTCCAGCTGCTGGACTTATGGTTCTGGATATAATACAGCTAGAGTCCCAGCCACAAGTATTGATAATACTCAAACATTCAACGAGTTTCTCTTGTCTTTGAAAAGGCTGGCAGAAACATCTCAAACCTCTACTTGTGATCGTGGTTCTCTAACTAGAATTAGAAACTGTGATACTGAACCAAATTATACAGCAAAACAAGTGGGTGTCCCTGGCAAAGAAACATTTGGGGATGCAATTGGTGCTTTAGTTGCAGAGACATGTACACCACCCACAAAAAAGAGGCAGAATAGAAAGAAAAGTGTTCTTTCCAGTTCAGCACATTCTACCACAAATGAGATGCTACACCACCATAATTTTACATTGGAAAATTGCCCTCTGCCAATGGGGAAGCCATCAGACATTGTTCCTGAAGTACTATGGAACACCATGAACAATATTGATGCATTAACATTGCAATTTAGACAGCTAAACTTAAACGCAGAAGCCAGAGACCTTGCATTTCATGAGGAGAATGCACTTGTCCCTTATAAACAGAAAAACAGCCTTATCCATGGAGATGGGGTCATCGTTCCCTTTCACATTAAGAAACAGCATCTACGACCAAAGGTCAACCTTGATGATGAGACTGATAGAGTGTGGAAGCTTTTGCTGTTAGATATAAACAGTCATGGCATTGATGGAACAGATGAAGATAAGGCCAAGTGGTGGGAAGAAGAACGAAATGTGTTCCGAGGACGAGCCGACTCTTTTATTGCACGAATGCATCTTGTACAAGGAGACAGACGATTTTCTCGATGGAAAGGATCAGTTGTGGATTCAGTGGTTGGAGTTTTCCTCACCCAAAATGTCACTGACCATCTTTCCAGCTCTGCATTCATGTCCCTTGCTGCTCGATTTCCAAAAAATTCAAGCAGCATGTGCAAAAGACACCATAAAGAAGACACAAGGCTGGTAGTCAACGAACCACAAGTGCATATAGTGGAACCGGAAGAGAGCACAGAATGGGATGTAAAATTATTGAATCAATCTGTTTATGACCAGACTTCTACAATAGATATGGCTGAACATTCTGGAGAAAAAGAAGCCGTCAACAGCAATGAATCCTGTGGAACTCCCAGCAGTGTAATTAGCTTAACAGATGAATCAAACTCCAGATTGTCAGAATTACCTCAAAAGAATATTAAGGAACACTGTAGTCCTACGAGGAGTGGAATACTTAGTGCTACAATTGAGGAAGGAGAAGAAAAATCATGTTACAATGGTGATAGGAAAGAGTTAAATGACATAGTTTCATCCCAAGGCTCTGTTTTTTCCTCTCAAATATCTGGAGATTTTTCAAATGATCAAAATCCTGAGAAAATAGGATCATGCTCAGATAGCAACTCAGAAGTAGAAGTTCTGTCCAGCACAGCAAAGTACAACCATTTTGGTAGCAACACTTCCTTCAGTAAACTCCTTGAAATGGTTAGTTCGACCAAGTTTTATGAAGATAACAGTCAAAAAAGCGAATCAATTGAAAACTCAGGAATGCTTGAAGTTAACGGCTTTGATCCTTTCAAAACAGAAGCATCAACAAGTGACTTAAAGAAAAAGGATGAAAATGGCATGAACAGATCTAGTCTTCAAACAACAGAACCTGCAGGCCAAGTTGCAATTACCCATTCTCAAAGTATTGCATCTCAAGTCCATCCTCGGGAACAAAGCAATCACCAGCAGCAAAGCTTTTTCAACATTTCTGGACAAACTCAAGATCTTATGCAGAAAGAAAGGGGGTCAGGTCTTGGTGAGCAAAAAAATGCCACGAGGAATGGAACCAATGAGATAAGTTCTGCCCCAATAAAATTAAAGACCAAGGAACAAGGAAAAGAAAAAAAGGATGATTTTAACTGGGATAGTTTAAGAATTGATGCACAGGCTAAGGCTGGCAAAAGAGAAAAGACAGAAAACACCATGGATTCTTTGGACTGGGATGCTGTGAGATGTGCAGATGTCAGTGAAATCGCTGAGACCATCAAAGAACGGGGCATGAACAACAGGCTTGCTGAACGTATTAAGAATTTCCTGAATCGACTGGTTGAAGAACATGAAAGCATTGACCTTGAATGGCTTAGAGACGTTCCACCTGACAAAGCAAAAGAATACTTGCTCAGCATAAGAGGATTGGGATTGAAAAGTGTGGAATGCGTGCGGCTTTTAACACTGCACCATCTTGCCTTCCCGGTAGACACAAATGTCGGACGTATTGCCGTACGACTGGGATGGGTGCCTCTGCAGCCACTGCCTGAGTCACTGCAGTTGCATCTCCTAGAATTGTACCCGGTGTTGGAGTCAATACAAAAATATCTCTGGCCTCGACTGTGCAAGCTAGATCAGGAAACACTATATGAGCTACATTACCAGATGATTACATTTGGAAAGGTCTTCTGTACAAAAAGCAAACCAAATTGTAATGCATGCCCAATGAGAGCAGAATGTAGACACTTTGCTAGTGCATTTGCAAGTGCAAGGTTTGCACTGCCTGGACCAGAGCAGAAGAGTATAGTTAGCACAACTGGAAATAGTGTGATTAACCAGAACCCATCTGAAATCATCAGTCAGTTGCACTTGCCTCCACCTGAGAACACAGCCCAAGAAGATGAAATTCAACTAACAGAAGTGAGCAGACAATTGGAATCAAAATTTGAAATAAATATTTGCCAACCTATCATTGAAGAGCCCAGAACTCCAGAGCCAGAATGCTTGCAAGAATCACAAACTGATATAGAGGATGCTTTCTATGAGGATTCAAGTGAAATTCCAACCATCAATCTTAACATAGAAGAGTTCACTCTGAATTTACAAAATTACATGCAAGAAAATATGGAACTTCAAGGAGGTGAAATGTCAAAGGCATTGGTTGCTTTGAATCCACAAGCTGCTTCCATTCCTATGCCCAAGCTAAAGAATGTGGGCCGATTACGAACAGAGCATTGTGTTTATGAACTCCCAGATACGCATCCTCTTCTACAAGGGTGGGACACACGAGAGCCTGATGATCCAGGCAAATATCTTCTTGCTATATGGACTCCAGGTGAGACCGCAAATTCTATACAGCCACCAGAAAGCAATTGCAGCTCTCAAGAAGAATGTGGCCAACTCTGTAATGAGAAGGAATGTTTCTCATGCAACAGTTTCCGTGAAGCAAATTCTCAGATAGTTAGAGGGACACTCCTGATACCTTGTCGAACAGCTATGCGGGGGAGCTTTCCACTGAATGGCACCTATTTCCAAGTCAATGAGGTATTTGCTGACCATGACTCAAGTCTCAACCCAATTAGTGTGCCCCGAAGTTGGATCTGGAACCTCAACAGGCGAACAGTATATTTTGGGACCTCCGTAACAACAATATTTAAAGGTTTAACAACACAAGAAACTCAACAATGCTTTTGGAGAGGCTGGGGTTGGACGAATCATCAATGCGTCACTCATCATTCTATTTCCAATTTCCAATCAAATCATGGTTACCGTTGCGGACCGGAGGCTTTGCTCTAA 5949 0.4181 MEVGEMDRKETQVEVPWSPGPPIKPVPMKPVPIYMPEERNQMDHLANGAVACAEFSLGQDKIGGSGDGSNVAGYSGKTCEQIVSDAVSSYRKLGFCEQLLAVEAESRNISVTQGNNDGLKNPFVPPLVLDNVLDPQETYIACCSMKSSQDTSYILDNANKEESRQIASMQVNMEEKDPGREERNVTANKLDNNVAPNSKELCDPAMEFAAVSSPVKENHNPDNGSSHDTDLNKTPQQKPRRRKHRPKVIKEGKPKRTRKPATPKPVQSKEKQPVKRKYVRKNALNKTSTPPTEETGELTKEMSCKRSLNFDIGTTYESSAAIENTRTLLGKENGVLVQETNVGPAFDLNTSMKQASNSYMSLPEDTQALNTSSGRKSSGTKPEENPPPKRKYVKRKGVNKTSAPPIEVPGNLTEETTSASAQTSCTGSINFDERASEQSYAVKENPTGHPGSEIGVVMKEMNVGLAYDLNTSMKQALNDDMTLPKDTQAPSSSSKIKLPGTKRKENLTGKRKNARKKGSNPSPIPPTEMTELTEAMILESNMSWRRSLNFDIGNVGRENLDLDIGKENMVLEERKVGPTYKDTWLKEAVNICMSLPEETQHPSTSISKCTSPGAKLNANSVEKKNKKGRATAWGGNISNSQSSSIRLQMVGSKRKHSDTFNRADDSSMNLIGVQYNGLPSYQHLSTSISKCTSPGAKLNANSVEKKNKKIRATARGGNISNSQSSSIGLQMVGSKRKHSGTFNRADDSSLNLIGVQYNGLPSYHTSLCLQFPKIQKKRRTEKGNATKEVQLTCPQEDALGHPYASSSSCWTYGSGYNTARVPATSIDNTQTFNEFLLSLKRLAETSQTSTCDRGSLTRIRNCDTEPNYTAKQVGVPGKETFGDAIGALVAETCTPPTKKRQNRKKSVLSSSAHSTTNEMLHHHNFTLENCPLPMGKPSDIVPEVLWNTMNNIDALTLQFRQLNLNAEARDLAFHEENALVPYKQKNSLIHGDGVIVPFHIKKQHLRPKVNLDDETDRVWKLLLLDINSHGIDGTDEDKAKWWEEERNVFRGRADSFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVTDHLSSSAFMSLAARFPKNSSSMCKRHHKEDTRLVVNEPQVHIVEPEESTEWDVKLLNQSVYDQTSTIDMAEHSGEKEAVNSNESCGTPSSVISLTDESNSRLSELPQKNIKEHCSPTRSGILSATIEEGEEKSCYNGDRKELNDIVSSQGSVFSSQISGDFSNDQNPEKIGSCSDSNSEVEVLSSTAKYNHFGSNTSFSKLLEMVSSTKFYEDNSQKSESIENSGMLEVNGFDPFKTEASTSDLKKKDENGMNRSSLQTTEPAGQVAITHSQSIASQVHPREQSNHQQQSFFNISGQTQDLMQKERGSGLGEQKNATRNGTNEISSAPIKLKTKEQGKEKKDDFNWDSLRIDAQAKAGKREKTENTMDSLDWDAVRCADVSEIAETIKERGMNNRLAERIKNFLNRLVEEHESIDLEWLRDVPPDKAKEYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQETLYELHYQMITFGKVFCTKSKPNCNACPMRAECRHFASAFASARFALPGPEQKSIVSTTGNSVINQNPSEIISQLHLPPPENTAQEDEIQLTEVSRQLESKFEINICQPIIEEPRTPEPECLQESQTDIEDAFYEDSSEIPTINLNIEEFTLNLQNYMQENMELQGGEMSKALVALNPQAASIPMPKLKNVGRLRTEHCVYELPDTHPLLQGWDTREPDDPGKYLLAIWTPGETANSIQPPESNCSSQEECGQLCNEKECFSCNSFREANSQIVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPISVPRSWIWNLNRRTVYFGTSVTTIFKGLTTQETQQCFWRGWGWTNHQCVTHHSISNFQSNHGYRCGPEALL* 1983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0571 1982 Gene3D Hypothetical protein; domain 2 1440 1535 - -
Gso10g0571 1982 MobiDBLite consensus disorder prediction 1302 1354 - -
Gso10g0571 1982 Pfam RRM in Demeter 1874 1952 IPR028925 -
Gso10g0571 1982 MobiDBLite consensus disorder prediction 481 497 - -
Gso10g0571 1982 CDD ENDO3c 1461 1579 IPR003265 GO:0006284
Gso10g0571 1982 MobiDBLite consensus disorder prediction 1 21 - -
Gso10g0571 1982 SMART endo3end 1441 1613 IPR003265 GO:0006284
Gso10g0571 1982 MobiDBLite consensus disorder prediction 214 300 - -
Gso10g0571 1982 MobiDBLite consensus disorder prediction 170 199 - -
Gso10g0571 1982 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 495 694 IPR044811 GO:0019104|GO:0035514|GO:0080111
Gso10g0571 1982 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 377 492 IPR044811 GO:0019104|GO:0035514|GO:0080111
Gso10g0571 1982 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 703 1959 IPR044811 GO:0019104|GO:0035514|GO:0080111
Gso10g0571 1982 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 136 371 IPR044811 GO:0019104|GO:0035514|GO:0080111
Gso10g0571 1982 MobiDBLite consensus disorder prediction 411 425 - -
Gso10g0571 1982 Pfam Permuted single zf-CXXC unit 1839 1871 IPR028924 -
Gso10g0571 1982 SMART ccc3 1614 1634 IPR003651 GO:0051539
Gso10g0571 1982 MobiDBLite consensus disorder prediction 1169 1190 - -
Gso10g0571 1982 MobiDBLite consensus disorder prediction 366 380 - -
Gso10g0571 1982 MobiDBLite consensus disorder prediction 481 529 - -
Gso10g0571 1982 MobiDBLite consensus disorder prediction 1164 1190 - -
Gso10g0571 1982 MobiDBLite consensus disorder prediction 237 254 - -
Gso10g0571 1982 MobiDBLite consensus disorder prediction 1396 1419 - -
Gso10g0571 1982 MobiDBLite consensus disorder prediction 366 425 - -
Gso10g0571 1982 MobiDBLite consensus disorder prediction 894 915 - -
Gso10g0571 1982 Gene3D - 1536 1651 IPR023170 -
Gso10g0571 1982 MobiDBLite consensus disorder prediction 255 273 - -
Gso10g0571 1982 SUPERFAMILY DNA-glycosylase 1051 1636 IPR011257 GO:0003824|GO:0006281
Gso10g0571 1982 MobiDBLite consensus disorder prediction 1396 1428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0571 Gso-Chr10 6501317 6518408 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0571 - - gmx:100806794 3821.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1604 3 41959272 41970932 Gso10g0571 10 6501317 6518408 PCT
Gso10g0571 10 6501317 6518408 Gso3g1604 3 41959272 41970932 PCT