Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0358 ATGCCGAACCTCTGCACTGTTAGTTCTAATGCTTCTTCAAACTTCATATTCGGCGTTCAACCTCACAACTTCTACAATGTTTTTGGGTCAAGGAGAACGAGACCTCGGTGCAGGGTCAGCATGTCCTCCTCCGATCCTCAAAACGCCGTCGTTGTGGGGTGTGGATCGGTGACCATAGATTTCTTGGCCACGGTTGCGGCTTACCCTAAGCCGGATGACAAAATCAGAAGCACCAGCTTGAAGGTTCAAGGAGGTGGCAATGTCGGCAACGCCTTAACCTGCCTTGCTCGCTTGGGCTTAAACCCAAGGCTCATTTCCAAGATTGCTGATGACAGTCAAGGCAGGAGTATATTAGACGAGCTACGAGATGATGGTGTAGATACATCCTTTATTGTGGTGTCTAAGGAGGGAACTTCACCATTTACATATATTATTGTGGACAACCAAACGAAGACCCGCACTTGTATACATACCGCAGGATATCCTCCAATGATACCAGACGAACTGTCAAAATCAAGTTTATTATCTGCATTGGATGGAGCAAAATTTGCTTATTTTGATGGGAGGTTGCCTGATACTGCTCTAGTTGTTGCCCAAGAGGCAGTTAGAAAGAATATACCCATCTTAATAGATGCAGAAAGGCCAAGGGAAGGGTTAGACGATCTCCTAAAATTAGCTGATTATGTTGTATGCTCAGCAAAGTTTCCAGCATCATGGACAAAGGCATCAACTGTTCCACAAGCACTTGTTTCTATGCTTTTAAGGTTGCCCAACATAAAATTTGTGATTGTAACTTTGGGGAAAGATGGTTGTATAATGCTGGAGAGAAGTGTTGATGCAGGTCCTTCCACGGAAGAAGTGGATGTAGACAGCTTATTGGAATCATTGGAGATAAAAAGGGATAAGAGTGTATCCATTCCAACCTGCATATCATCATCAGTGGCAAAATTGAAGGCAGAGGGGATAGGAACAGTTAGTGGGAAGTTGTATGTTGGAACAGCTGAGAGTATTCCACCATCAGAGCTTGTTGATACCACTGGTGCTGGGGATGCATTTATTGGAGCTGTTATCTATGCTATTTGTGCCAAGTTTACACCAGAGACAATGCTATCCTTTGCTGCTAATGTGGCAGGTGCCAAGTGCAGGGATCTAGGAGCACGAAGTGGTCTTCCTTACCGTGCAGATCCACGCATAGCATCCTTTGTATTGGAGAAATTGAGTAGTTCAGCTTAA 1233 0.4453 MPNLCTVSSNASSNFIFGVQPHNFYNVFGSRRTRPRCRVSMSSSDPQNAVVVGCGSVTIDFLATVAAYPKPDDKIRSTSLKVQGGGNVGNALTCLARLGLNPRLISKIADDSQGRSILDELRDDGVDTSFIVVSKEGTSPFTYIIVDNQTKTRTCIHTAGYPPMIPDELSKSSLLSALDGAKFAYFDGRLPDTALVVAQEAVRKNIPILIDAERPREGLDDLLKLADYVVCSAKFPASWTKASTVPQALVSMLLRLPNIKFVIVTLGKDGCIMLERSVDAGPSTEEVDVDSLLESLEIKRDKSVSIPTCISSSVAKLKAEGIGTVSGKLYVGTAESIPPSELVDTTGAGDAFIGAVIYAICAKFTPETMLSFAANVAGAKCRDLGARSGLPYRADPRIASFVLEKLSSSA* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0358 410 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 344 357 IPR002173 GO:0016773
Gso10g0358 410 Gene3D - 50 388 IPR029056 -
Gso10g0358 410 PRINTS Ribokinase signature 53 74 IPR002139 GO:0016301
Gso10g0358 410 PRINTS Ribokinase signature 80 99 IPR002139 GO:0016301
Gso10g0358 410 PRINTS Ribokinase signature 262 273 IPR002139 GO:0016301
Gso10g0358 410 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 38 409 - -
Gso10g0358 410 SUPERFAMILY Ribokinase-like 51 395 IPR029056 -
Gso10g0358 410 Pfam pfkB family carbohydrate kinase 53 277 IPR011611 -
Gso10g0358 410 Pfam pfkB family carbohydrate kinase 329 391 IPR011611 -
Gso10g0358 410 PANTHER PFKB FAMILY CARBOHYDRATE KINASE 38 409 - -
Gso10g0358 410 CDD ribokinase_group_B 50 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0358 Gso-Chr10 3762714 3767439 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0358 - - gmx:100802550 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1425 3 40212097 40216971 Gso10g0358 10 3762714 3767439 PCT
Gso10g0358 10 3762714 3767439 Gso3g1425 3 40212097 40216971 PCT