Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02227 ATGGAAGACCTGATTCCCATACTTTTGCAGTACATTAAAAGCCGTGAGAAACATGGAGGATATGTGTTATTGGTTGATCACATTGCTCGCACTTTTGATGCACCTTTCCTCATCCATGAGTTCATCCGTTGTTCCACTGAGCTTCCTTTGGGACGTGAACTGATCAAGTCTAGTGGAACAAACCTTTCTTCAGCATCTCTTGTTGCTCTTCAGGAGTTCTACGAAGTTAAAGTGGATGGATCAGCTCACAGAGCCAGGGTAGATGTGAACTCATTGACCCAGATACTTCCAATGTTGACCCCTGATCTGAAGCTGACCTCGTCAGAAAATCATTAA 336 0.4375 MEDLIPILLQYIKSREKHGGYVLLVDHIARTFDAPFLIHEFIRCSTELPLGRELIKSSGTNLSSASLVALQEFYEVKVDGSAHRARVDVNSLTQILPMLTPDLKLTSSENH 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02227 111 Gene3D - 1 111 IPR036397 GO:0003676
Gma20g02227 111 PANTHER POLYMERASE III POLC-TYPE, PUTATIVE ISOFORM 1-RELATED 1 107 - -
Gma20g02227 111 SUPERFAMILY Ribonuclease H-like 2 101 IPR012337 -
Gma20g02227 111 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 1 107 IPR040393 GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02227 Gma-Chr20 49394892 49395311 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02227 - - gmx:102663053 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01473 10 41827845 41829955 Gma20g02227 20 49394892 49395311 ECH
Gma20g02227 20 49394892 49395311 Gma20g02227 20 49394892 49395311 ECH
Gma10g01473 10 41827845 41829955 Gma20g02227 20 49394892 49395311 GST
Gma19g02181 19 50639677 50642569 Gma20g02227 20 49394892 49395311 PCT
Gma03g02149 03 46939783 46944097 Gma20g02227 20 49394892 49395311 PCT
Gma20g02227 20 49394892 49395311 Gma19g02181 19 50639677 50642569 PCT
Gma20g02227 20 49394892 49395311 Gma03g02149 03 46939783 46944097 PCT