Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02149 ATGAAGACAGGCTCCATGATTTTTTCATTATTCCATGTACCTAGATGTAGAATACAAAGCTTAGCTAATTGCTGGGGTGAAACCTTCCACGGTTTCAGTACAACTTGTGGAAACAATTCTAGCATCAGGTTGCTTGGTTCTAGAATTTATGGTCTTCAGGGAGGACAGAGAAAGAAATGGACAAGACCTATAACTACAAATACAGAAGGCAAGGGGAGCACCAAATCCAAAAGTATCAAGCATGAGATTTTGAGTGAAACCATTTTAGCAAATGCTACAGCAAATGTAAATAAAACACAGCTAGATCAATCCCAAGAAATTCAGGATTGTGACATACAACAAGAGATTGCTGAGAATAAAGACTTGTCCAGCTATACTGTTATTGTTTTTGATATAGAGACCACAGGGTTTAGCAGAGAGAATGAAAGAATCATTGAAATTGCACTTCGAGATCTTCAGGGTGGCGAGAACAGCACTTTTCAGACTCTTGTAAACCCTCAATGTAAAGTTCCTAATTCACATATTCATGGCATTACTACTCAGATGGTCAACAAACCTGATGTTCCAAGGATGGAGGACCTAATTCCCATTTTATTCCAATACGTTCGAAGTCGTGAGAAGCCTGGGGGAGATGTGTTATTTGTAGCTCACAATGCTCGCTGTTTTGATGTGCCCTTCATCATCAGTGAGTTACGGCGTTATTCCATAAAGATTCCTCCTAATTGGTTGTTTTTGGACACCCTTCCTTTAGCGCGGGAACTAATGAagtccggagGAACAACACTTTCTTCATCATCCCTAGCTGCCCTTCGTGACCTCTACGGAATTAAGGTGGATGGATCAGCTCACAGGGCTATGGTAGATGTGAACACATTGTCGTTGATTCTTTCCAGGTTGACCTCTGATCTGAAATTGACCCTATCTGACCTTGTCGACAAATCATTCACAGAATCAGATATTATCAACTCTAAGAAGAAGAAGAAGAATTAG 990 0.399 MKTGSMIFSLFHVPRCRIQSLANCWGETFHGFSTTCGNNSSIRLLGSRIYGLQGGQRKKWTRPITTNTEGKGSTKSKSIKHEILSETILANATANVNKTQLDQSQEIQDCDIQQEIAENKDLSSYTVIVFDIETTGFSRENERIIEIALRDLQGGENSTFQTLVNPQCKVPNSHIHGITTQMVNKPDVPRMEDLIPILFQYVRSREKPGGDVLFVAHNARCFDVPFIISELRRYSIKIPPNWLFLDTLPLARELMKSGGTTLSSSSLAALRDLYGIKVDGSAHRAMVDVNTLSLILSRLTSDLKLTLSDLVDKSFTESDIINSKKKKKN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02149 329 CDD DEDDh 128 296 - -
Gma03g02149 329 PANTHER POLYMERASE III POLC-TYPE, PUTATIVE ISOFORM 1-RELATED 3 328 - -
Gma03g02149 329 SMART exoiiiendus 126 305 IPR013520 -
Gma03g02149 329 Pfam Exonuclease 128 292 IPR013520 -
Gma03g02149 329 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 3 328 IPR040393 GO:0008408
Gma03g02149 329 Gene3D - 125 315 IPR036397 GO:0003676
Gma03g02149 329 SUPERFAMILY Ribonuclease H-like 124 305 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02149 Gma-Chr3 46939783 46944097 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02149 - - gmx:100799702 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02181 19 50639677 50642569 Gma03g02149 03 46939783 46944097 ECH
Gma03g02149 03 46939783 46944097 Gma03g02149 03 46939783 46944097 ECH
Gma19g02181 19 50639677 50642569 Gma03g02149 03 46939783 46944097 GST
Gma03g02149 03 46939783 46944097 Gma10g01473 10 41827845 41829955 PCT
Gma03g02149 03 46939783 46944097 Gma20g02227 20 49394892 49395311 PCT
Gma10g01473 10 41827845 41829955 Gma03g02149 03 46939783 46944097 PCT
Gma20g02227 20 49394892 49395311 Gma03g02149 03 46939783 46944097 PCT