Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01653 ATGGCTTCCATTGCCGCCATGGCAGAAAACAAGAACCCAGAACAAGAAGACCAAGCCAGATTCCCAATTCTGACGGTGCTCAAGAACAACGCAATTGTCAAGAGCATCTTCATCGTACTCGATGACCACAACGAGGATCAGATGGTCTTGATTGGCCGACACCCTAACTGCAACATCGTCCTCACGCACCCTAGCGTGAGCCGCTTCCACCTCAGGATTCGCTCCAACCATTCTTCCCGCACTCTTTCCCTCTTTGATTTGGCTTCTGTGCATGGTACGTGGGTGCGTGGGAGGAAGCTCGAACCCGGTGTGAGTGCTGAATTGAAGGAAGGTGACACTTTCACTGTTGGGATATCCACTAGGATTTATCGTCTCAGCTGGGCTCCTCTTACCCAATTGGATGATGAGAATCTGGAACTTAGAGCAGAGGAAGAGATTCCGATGCCTGAAGACATTGTTTCTCTTTGTTGTGATGAAGAAAGGAAGAGCCATGCTGAAGATGAGGCATTGGGAGTTCTCAATGGAACTGAAACATCATGTGCTCCAACAAACTCTGGTGGTGAAAACATAATTTGTGACTGTCAATTATCACCCCCATACATACAATCACCCCCTTATGCACAACCGGTTGATGAACTTCATAACACCAAGAAAATTGAAGCTTGTGTTGAAGTGGAGATACCTAGAGAAACTAATTTGCTATGCACATTGAGGGAATATTTGAAACACAACATATATGTCTGCCAGTTGTGGAAGCACTTCCCAATGAATATTGATCCCACGTCTTTCCATGGAAAAGAtgttgctgcagtggctgtagtacctacagaatctgaatttggatgcacacacgaagataatgacaatattgaaggtattttaaatactggatcaagaacattcaattctgagaacacgcgtttgatagttgacgaagatattcctgattctgaatttcatcaaatggaagtcgttgaagaagtttctgtggattcagtacctggtggagaaaaacaagatgaattgcattggtccagctcacctacaaatcttgatcatgcgtctttagatgaaaaatttgttgctgcagtggctataatacccacagaatctgaatttggatgcacacatggagctaatgataaggttgaagatattttaactactggatcaagaatattcaattctgagaacacatgtttgatagttgacaaagatattcctgattctgaatttcatcaaatggaagttgaagaaatttcagtggattcagtacctgatggagaaaaacaagatgaatGCAAGGAAGAGGACCTGAATGCTAAATCTTGCCGTGAAGAAGGGTACTCACTGGATGAAGTAGTTGAAGATAATGGAAACAAATGCATTAAAACCATAGATCCTGCATCTTTTGATGGAAAGGGCTTGGCTACAGTGACTGTAATACCCACAGAATCTGAATTTGGATGGACACTCGGAGATAATGAAAGGATTGAAGATATTTTAGAAATGGAGTCAAGAACTATCAATTCTGAGAACACATCCTTGCTAGATGAAGAAGCGATTCCTGTTGACAAATTTCAACTAATCAATATTATTGAAGAAGTTGCTATGGATTCAATATCTGATGGAGAAAAAGAAGATAAATGTGGGATGGAGTTGGAGTCAAAGTTGCCGGCTTCCCTGAATGAGAAATCCTGTCACGAACAAGGTAACTCAGTGACTGAAATAGCTGGAGATACTGGAAAAAAGTGTGCAAGCAGCATCTCCTTGCCTCATCATTTCAAGTGTAAGCCTGCTAGTGCGCCCCAAGTTCGAGCCAGAAAGAGTAGATTTGTGAGCACAGCTAAGGTTGGCACTGAAGTTAAAAGGAGTAATGTAAAGAATGTTGTCATAAATAAATCAATGCCAAAGGATCTTTCCTCTGTTTTTGATGAGAAAGAAGCATTCACTCCAAATAACGAAAACTTGTGCCCAAAATACCTATCACTTGCAGTTTATGAAAAAGAAAGGTCACCCAATTTGAGCTATTTTAGACCCAGCATCTATTCAGCCAAAAACATAAGCAGTGTTTCTAACAAAGTGAACCAAACTCCAAAAGTAGCTCAAGAATGGAAGTCACAAAGAAAGCCTCTCCAATGTCGTATCAACTTGGTCCATGAGCAAGATTTGATGCAGTTAAAAAAGAACAGAGTGGAAAGGGTACCACCCTTCCAATCACTAATGAACTCTAGAGGCAATCATAAATCTGTGACTGTTTCTGCTGCAAAAAGCATTGATGATGCCCATATTTGTGGACAGATTTCAAACAAGTGCACTAAACCTTCTCAGTATACTAGTAGAGAACAAAAGAGGAGCTGGGACATGGTTGTAGACACTGCTTCTCTTCTGAACAAGGAGTCAAGGAAAGCTTTGCAGCTTCTACAAGGTCTCAAGGGGACCCGTTTAACCATTCCAAGTTTAGTCATAAGGGAACTAGGCAGTATGAAGCAACAATTTAGAATTTTGAGAACAACTTCAGAGGCTTCTTTGGCATTAGAGTGGATTGAAGAATGCTTGGAGAAAACAAGGTGGTGGATTCATATCCAAAGCTCAATGGAGGAGTTCAGGCTGACAGCTCTAACCCCTCCTGCTTCTCCTCAGACTCGATTTATTGAAGAGAGTTGGGCTTTGCCTGGTTTCAATACCTCGAAGAAATGTGCTTCACCTAAAGTTGAAGATCACATCCTTGACTGTGCCCTTCCACTTTTTCACCATGATTTTGGCAGCCGGAATTGA 2778 0.3488 MASIAAMAENKNPEQEDQARFPILTVLKNNAIVKSIFIVLDDHNEDQMVLIGRHPNCNIVLTHPSVSRFHLRIRSNHSSRTLSLFDLASVHGTWVRGRKLEPGVSAELKEGDTFTVGISTRIYRLSWAPLTQLDDENLELRAEEEIPMPEDIVSLCCDEERKSHAEDEALGVLNGTETSCAPTNSGGENIICDCQLSPPYIQSPPYAQPVDELHNTKKIEACVEVEIPRETNLLCTLREYLKHNIYVCQLWKHFPMNIDPTSFHGKDVAAVAVVPTESEFGCTHEDNDNIEGILNTGSRTFNSENTRLIVDEDIPDSEFHQMEVVEEVSVDSVPGGEKQDELHWSSSPTNLDHASLDEKFVAAVAIIPTESEFGCTHGANDKVEDILTTGSRIFNSENTCLIVDKDIPDSEFHQMEVEEISVDSVPDGEKQDECKEEDLNAKSCREEGYSLDEVVEDNGNKCIKTIDPASFDGKGLATVTVIPTESEFGWTLGDNERIEDILEMESRTINSENTSLLDEEAIPVDKFQLINIIEEVAMDSISDGEKEDKCGMELESKLPASLNEKSCHEQGNSVTEIAGDTGKKCASSISLPHHFKCKPASAPQVRARKSRFVSTAKVGTEVKRSNVKNVVINKSMPKDLSSVFDEKEAFTPNNENLCPKYLSLAVYEKERSPNLSYFRPSIYSAKNISSVSNKVNQTPKVAQEWKSQRKPLQCRINLVHEQDLMQLKKNRVERVPPFQSLMNSRGNHKSVTVSAAKSIDDAHICGQISNKCTKPSQYTSREQKRSWDMVVDTASLLNKESRKALQLLQGLKGTRLTIPSLVIRELGSMKQQFRILRTTSEASLALEWIEECLEKTRWWIHIQSSMEEFRLTALTPPASPQTRFIEESWALPGFNTSKKCASPKVEDHILDCALPLFHHDFGSRN 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01653 925 MobiDBLite consensus disorder prediction 330 349 - -
Gma20g01653 925 PANTHER TRANSMEMBRANE PROTEIN 18 7 914 - -
Gma20g01653 925 CDD FHA 22 117 IPR000253 GO:0005515
Gma20g01653 925 Gene3D - 783 924 - -
Gma20g01653 925 PANTHER FHA DOMAIN-CONTAINING PROTEIN PS1 7 914 - -
Gma20g01653 925 SUPERFAMILY SMAD/FHA domain 21 135 IPR008984 GO:0005515
Gma20g01653 925 Pfam FHA domain 50 117 IPR000253 GO:0005515
Gma20g01653 925 ProSiteProfiles Forkhead-associated (FHA) domain profile. 49 100 IPR000253 GO:0005515
Gma20g01653 925 SMART FHA_2 48 100 IPR000253 GO:0005515
Gma20g01653 925 Gene3D - 2 131 - -
Gma20g01653 925 Pfam PIN domain 789 916 IPR002716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01653 Gma-Chr20 43629451 43633478 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01653 - - pvu:PHAVU_007G090600g 1143.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01653 20 43629451 43633478 Gma20g01653 20 43629451 43633478 ECH
Gma10g02061 10 48136162 48141215 Gma20g01653 20 43629451 43633478 GST