Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02061 ATGGcagaaaagaagaacccagaacaagaagaacAACATCGATTCCCAGTTCTGACAGTGCTCAAGAACAACGCAATCCTCAAGAACATCTTCATCGTACTCGATGAACACGACGAGGATCAGACGGTTCTGATTGGACGACACCCTAACTGCAACATCGTCCTCACGCACCCCAGCGTGAGCCGCTTCCACCTCAGGATTCGCTCCAACCCCTCTTCCCGCACTCTTTCACTCGTTGATTTGGCTTCTGTGCAGGGTACGTGGGTGCGTGGGAGGAAGCTCGAGCCAGGAGTGAGTGTAGAATTGAAGGAAGGTGACACCTTCACTGTTGGGATTTCCACTAGGATTTATCGTCTCTGCTGGGCTCCTCTTACCCAATTGGGTGTCGTTGTGCCCCAACAACATCAAAAAGAAGATGAACAAGAAAACATAATCAAGGATGAGAATTTGGAACACACTGCAGAACAAGATATTCCGATGTCTGAAGACATTGTTTCTGTTTGTTGTGATGAAGAAAGGAAGATCCATTCTGAAGATGAGGCATTGGGAGTACCCAATGGAACTGAAACATCATGTTTTCCTACAAACTCTTGTGTTGAAAACATAATTTGTGACTGTCAATTATCACCCCCATACATACAATCACCCCCTTGTGCACAACCGGTTGATGAGCTTGATAACACCAAGAAAATTGAAGCTCGTCTCGAAGTGGAGATGCCTGGAGAAACTAATTTGCTTTGCACATTGAGGGAATATTTGAAACACAACATATGTCTGCCAGTTGTGGAAGCAGTCCAGGGGACCAAGATGCAGCAATTTCAAGCCCCACATGATACTTTTACCGGACAACCACCTTCCTTGGAAATGCATTGGTCCAGCTTTCAAATaaatattgatccttcgtcttttgatgaaaaacatgctgctgcagtgcctgtaatacctacagaatctgaatttggatgcacacatggagataatgacaaggttgaaggtattttaactactgcaccaagaagtttcaattctgagaacacatgtttgatagttgacgaagatatccctgattctgaatttcataaaatggaagttgttgaagaagtttctgtggattcagtacctgatggagaaaaacaagatgaaatgcatgggtcaagctcacctacaaatcttgatcccgcgtttttagatgaaaaacatgttgctgcagtggctgtaatacctacagaatctgaatttggatgcacatacggagataatgacaaagttgaagatattttaactactggatcaagaacattcaattctgagaacacatgcttgatagttgacaaagatattcctgattctgaatttcatcaaatggaagtagttgaagaaatatctgtggattcagtacctgatgaagaaaaacaagatgaaTGCGATGAAGAGAACCTGAATGGTAAATCTTGCCGTGAGGAAgggtactcactagatgaagtagttgaagataatggaaacaaatgcattaaaaacatagatcctgcatcttttgatggaaagggcttgactgcagtaactgtaatacccacagaatttgaatttggatgcacactcggagataatgaaaggattgaagatattttagaaatggagtcaagaactatcaattctgagaacacatccttactggatgagaaagctattgctaatgctattattgctgttaccaaatttcaagtagtcaatattgttgaagaagTTGCTATGGATTCAATATCTGATGGAGAAAAAGAAGATAAATGTGGGAAGGAGTTGGAGTCAAAGTTGCCGGCTTCCCTGAATGCGAAGTCCTGTCACGAACAAGGTAAGTCTGTGGCTGAAATAGCTGAAGATACTGGAAAAAAATGTGCAAGCAGCATCTCCTCCACATCATTTCAAGTAGAATCACCAAATTCTTCGATGCCTCGGGAACAGACCCCTCAATCTCTCACTGCTGTGACAAGATGCTCTGGAGGGGAGTTCCTTGAAAACCATGTCAAACCAACAGAGAAAAGCTCAGCCTTTGGCAGTATCTGGTCAAGGTGTAAGCCTGCTAGTGCTCCCCTAGTTCAAGCCAGAAAGAGTAGATTTATGAGCACAGCTAAGGTTGGCACTGAAGTTAAAAGGAGTAATGAGAAGAATGTTGTCATAAATAAATTAATGCCGAAGGATCTTTCTGCTGTTTTTGATGAGGAGAAAGAAGCATTCATTCTAAATAAGGAAAATTTAAGCCCAAATACCTATCACTTGCAGTTTATGAGAAAGAAAGATAAGCCAGAAGAAATTAAACATTCCATATCACAAAGGTCACCCAATTTGAGCTATTTTAGTCCCAGGATCTATTTAGACAAAAGAATAAGCAGTGTTTCAAACAAAGTGAACCAGACTCCAAAAGTAGCTCAAGAATGGAAGTCACAAAGAAAGCCTCTTCAATGTCATATCAACTTGGTCCATGAGCAAGATATGATGGAGTTAAAAAAGAACAGAGTGGAAAAGGTAGCATCCTTCCCATCACTAATGAACTCAGGAGGGAACCATAAATCAGTGACTGTTTCTGCTGCAAAAAGCATTGATGATGTGCCTATTTGTGGACAGATTTCAAATAAGTGCACTAAAACTTCTCAGCATACTAGTAGAGAACAAAAGAGGAGCTGGGACATGGTTGTAGACACTGCTTCTCTTCTGAACAAGGAGTCAAGGAAAGCTTTGCAGCTTCTACAAGGCCTCAAGGGGACTCGTTTAATCATTCCAAGTTTGGTCATAAGGGAACTCGGCAGCATGAAGCAAAAATTTAGAATTTTCAGAACAACTTCAGAGGCTTCTTTGGCATTAGAGTGGATTGAAGAATGCTTGGAGAAAACAAGGTGGTGGATTCATATCCAAAGCTCAATGGAGGAGTTCAGGCTGACAGCTCTAACCCATCATGCTTCTCCTCAGACTCGGTTTATTGAAGAGAGTTGGGCTTTTCCTGGTTTGAATACCTTGAAGAAATGTGCTTCACCTAAAGTTGAAGATCACATCCTTGACTCTGCCCTTCAATATGGAAGAAAGGAGAATGTTGGACAACTTGTCCTTCTTAGTAGTGATGTCTCATTGAAAATAAAATCCATGGCAAAGGGGTTGCTATGTGAGACAGTGCAACAATTTCGGCAGAGTTTAGTGAACCCCTTCTCTGAGAGGTTCATGTGGCCAAAGAGCTCTCCTCGAGGACTGACTTGGTCTTGCCAAGATGATTTAGTTTTAAGGGAGAAATATTGTGGATTGCCATCAAAAGCTGGTTTGAAGCTCATTACTTTCCATGATTAG 3330 0.3201 MAEKKNPEQEEQHRFPVLTVLKNNAILKNIFIVLDEHDEDQTVLIGRHPNCNIVLTHPSVSRFHLRIRSNPSSRTLSLVDLASVQGTWVRGRKLEPGVSVELKEGDTFTVGISTRIYRLCWAPLTQLGVVVPQQHQKEDEQENIIKDENLEHTAEQDIPMSEDIVSVCCDEERKIHSEDEALGVPNGTETSCFPTNSCVENIICDCQLSPPYIQSPPCAQPVDELDNTKKIEARLEVEMPGETNLLCTLREYLKHNICLPVVEAVQGTKMQQFQAPHDTFTGQPPSLEMHWSSFQINIDPSSFDEKHAAAVPVIPTESEFGCTHGDNDKVEGILTTAPRSFNSENTCLIVDEDIPDSEFHKMEVVEEVSVDSVPDGEKQDEMHGSSSPTNLDPAFLDEKHVAAVAVIPTESEFGCTYGDNDKVEDILTTGSRTFNSENTCLIVDKDIPDSEFHQMEVVEEISVDSVPDEEKQDECDEENLNGKSCREEGYSLDEVVEDNGNKCIKNIDPASFDGKGLTAVTVIPTEFEFGCTLGDNERIEDILEMESRTINSENTSLLDEKAIANAIIAVTKFQVVNIVEEVAMDSISDGEKEDKCGKELESKLPASLNAKSCHEQGKSVAEIAEDTGKKCASSISSTSFQVESPNSSMPREQTPQSLTAVTRCSGGEFLENHVKPTEKSSAFGSIWSRCKPASAPLVQARKSRFMSTAKVGTEVKRSNEKNVVINKLMPKDLSAVFDEEKEAFILNKENLSPNTYHLQFMRKKDKPEEIKHSISQRSPNLSYFSPRIYLDKRISSVSNKVNQTPKVAQEWKSQRKPLQCHINLVHEQDMMELKKNRVEKVASFPSLMNSGGNHKSVTVSAAKSIDDVPICGQISNKCTKTSQHTSREQKRSWDMVVDTASLLNKESRKALQLLQGLKGTRLIIPSLVIRELGSMKQKFRIFRTTSEASLALEWIEECLEKTRWWIHIQSSMEEFRLTALTHHASPQTRFIEESWAFPGLNTLKKCASPKVEDHILDSALQYGRKENVGQLVLLSSDVSLKIKSMAKGLLCETVQQFRQSLVNPFSERFMWPKSSPRGLTWSCQDDLVLREKYCGLPSKAGLKLITFHD 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02061 1109 Gene3D - 889 1062 - -
Gma10g02061 1109 SMART FHA_2 42 94 IPR000253 GO:0005515
Gma10g02061 1109 CDD FHA 16 111 IPR000253 GO:0005515
Gma10g02061 1109 Pfam FHA domain 44 111 IPR000253 GO:0005515
Gma10g02061 1109 Gene3D - 2 125 - -
Gma10g02061 1109 SUPERFAMILY SMAD/FHA domain 17 126 IPR008984 GO:0005515
Gma10g02061 1109 PANTHER TRANSMEMBRANE PROTEIN 18 4 1108 - -
Gma10g02061 1109 ProSiteProfiles Forkhead-associated (FHA) domain profile. 43 94 IPR000253 GO:0005515
Gma10g02061 1109 MobiDBLite consensus disorder prediction 636 657 - -
Gma10g02061 1109 MobiDBLite consensus disorder prediction 372 391 - -
Gma10g02061 1109 Pfam PIN domain 895 1054 IPR002716 -
Gma10g02061 1109 PANTHER FHA DOMAIN-CONTAINING PROTEIN PS1 4 1108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02061 Gma-Chr10 48136162 48141215 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02061 - - pvu:PHAVU_007G090600g 1538.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02061 10 48136162 48141215 Gma10g02061 10 48136162 48141215 ECH
Gma10g02061 10 48136162 48141215 Gma20g01653 20 43629451 43633478 GST