Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01581 ATGGCTGCAAAGCGCGTGTACCAAGTTTGGAAAGGAAGTAATAAATTCATATGTGGAGGGAGGTTGGTATTCGGGCCCGATGCTAGGTCCCTGTTTGTCACCTTGTTGCTGATTATTGTTCCAGTTATAATCTTTTGCATATGTGTAGCAAGGCATCTTCGGCATGAACTTTCTTCATATAATTCTGGATATGCTATTTTAGCTGTGGCTATTCTCTTTACTGTTCATGTCCTGGTGGTTCTCTTTCTTACTTCATCAGGTGATCCGGGCATTGTTCCAAGGAATCCACATCCCCCAGAAGAAGAGTTTCGTTATGATTCTTCAGTTTCTGTTGATGCTGGGGGAGCTGGACGACAAACGCCAAGTCTTCAGTTCCCTCGAACAAAAGAAGTTGTAGTCAATGGCATTGCTGTAAAGGTGAAATATTGTGAGACTTGTATGTTGTATCGTCCTCCTCGTTGCTCGCATTGCTCCATTTGCAACAACTGTGTTGAGCGTTTTGATCACCATTGCCCTTGGGTGGGCCAATGCATTGGTCTGAGGAACTACCGTTACTTCTTTATGTTTATTTCTTCAGCAACTATTCTGTGCATCTATGTGTTTTCCCTCTCAGCTTTTTACATCAAGGTTCTGATGGATAATTATGATGGCACAGTTTGGAAGGCAATGAAAGAATCCCCTGCATCTGTGATACTAATGGCTTATTGTTTCATCTCTTTGTGGTTTGTTGGTGGACTGACTGGTTTTCATTTATACCTTATAGGCTTAAATCAGACTACCTATGAAAATTTCCGGTACAGAGCTGAAGGCAGGATCAATGTTTTTAACCGGGGTTGTTTAAATAATTTTCTGGAAGTGTTTTGCACAAAAGTAAAGCCCTCAAGGAACAATTTCAGGGCATTTGCTCGAGAGGAGGTACCACCGAGACCTCTGGCTCCGATCATTCCCCGGGATCGTGAGGACTTGGGTGGAGACCACCGCCCTAAGGTTGAAGCCGATCTTGATATTGGTGAAGACCTATTGAAGATATCACAGCGCAGGAACATCGAAGAACTTGATGAGGACATTCGGAGCAGAGGGAGCAATGGACCACCCCACAATGCATCTGAACCTGACTCAATTTTGTCCTCAGATCATCGAGCTCCCACAATTCGATCTGATGCTAGGCACTCGAGTTGGGAAAGGAGTGGAAACTGGGAATTTGCACAAGATGCCCTTGCCAATTCAAATGCAACAGAAAGCAGAAACTATGTGACTTCAAAGGAAATGCGCCAATGA 1278 0.4397 MAAKRVYQVWKGSNKFICGGRLVFGPDARSLFVTLLLIIVPVIIFCICVARHLRHELSSYNSGYAILAVAILFTVHVLVVLFLTSSGDPGIVPRNPHPPEEEFRYDSSVSVDAGGAGRQTPSLQFPRTKEVVVNGIAVKVKYCETCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFISSATILCIYVFSLSAFYIKVLMDNYDGTVWKAMKESPASVILMAYCFISLWFVGGLTGFHLYLIGLNQTTYENFRYRAEGRINVFNRGCLNNFLEVFCTKVKPSRNNFRAFAREEVPPRPLAPIIPRDREDLGGDHRPKVEADLDIGEDLLKISQRRNIEELDEDIRSRGSNGPPHNASEPDSILSSDHRAPTIRSDARHSSWERSGNWEFAQDALANSNATESRNYVTSKEMRQ 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01581 425 Pfam DHHC palmitoyltransferase 141 265 IPR001594 GO:0016409
Gma20g01581 425 ProSiteProfiles DHHC domain profile. 141 191 - -
Gma20g01581 425 MobiDBLite consensus disorder prediction 396 418 - -
Gma20g01581 425 MobiDBLite consensus disorder prediction 362 380 - -
Gma20g01581 425 MobiDBLite consensus disorder prediction 354 425 - -
Gma20g01581 425 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 6 424 - -
Gma20g01581 425 PANTHER S-ACYLTRANSFERASE 6 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01581 Gma-Chr20 42906743 42911757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01581 65 287 Lipid Metabolism Gene Families AT4G22750 27.350 3.36e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01581 K16675 - gmx:100820208 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01581 20 42906743 42911757 Gma20g01581 20 42906743 42911757 ECH
Gma10g02132 10 48812174 48816559 Gma20g01581 20 42906743 42911757 GST
Gma16g01474 16 33974762 33985390 Gma20g01581 20 42906743 42911757 PCT
Gma02g00719 02 6928650 6934511 Gma20g01581 20 42906743 42911757 PCT
Gma20g01581 20 42906743 42911757 Gma16g01474 16 33974762 33985390 PCT
Gma20g01581 20 42906743 42911757 Gma02g00719 02 6928650 6934511 PCT