Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01474 ATGGCACCGAAGCGCGTTTATGAAGCATGGAAAGGAAGTAATAAATTCCTATTTGGAGGAAGGTTGATATTTGGACCGGATGCTAGGTCACTGCTTGTCACCTTGTTGCTGATCATTGTTCCAGTTATTGTCTTTTGTGTATTTGTAGCAAGGCATCTTCGGCATGAATTTTCTTCATATAATGCAGGATATGCTATTTTGGTGGTGGCAGTTCTCTTTAATATTTATGTGTTGATTCTTCTCTTTCTTACTTCCTCTCGTGATCCGGGCGTTATCCCAAGGAATTTACATCCACCAGAGGAAGAGTTCCGTTATGACTCTTCAGTTTCTGTTGAAATTGGGGGACGCCAAACTCCGAGCCTTCAGTTCCCTCGAACAAAAGAAGTAATGGTAAATGGCCATTCTGTGAAGGTGAAATATTGTGACACTTGTATGCTCTATCGTCCTCCTCGTTGTTCACATTGCTCCATTTGCAACAATTGTGTTGAACGTTTTGATCACCATTGCCCTTGGGTGGGCCAATGTATTGGGCTGAGGAACTACCGTTACTTCTTTCTGTTTGTTTCTTCGGCAACTATTCTATGTATCTATGTGTTTTCCATCTCAGCTTTTTACATCAAGGTTCTGATGGATCATTATAAGGGGACAGTTTGGAAGGCAATGAAAGAATCCCCTGCATCTGTTATATTAATGGCATATTGTTTCATCTCTTTGTGGTTTGTCGGTGGACTAACTGGCTTTCATTTGTACCTTATTGGCACAAATCAGACTACCTATGAGAACTTCCGCTACAGAGCCGATAACAGGATCAATGTTTACAATCTGGGTTGTTTTAACAATTTCCTAGAAGTATTTTGTACAAAAGTGAAGCCCTCAAGGAACAATTTCCGAGCTTTTGTTCAAGAGGAGGTACCGAGGCCACCCCCTCCGGTCATTTCCCGGGAACCCGAACCAGATCTGGGTGGTGGAGATCCACGTTCTAAAGTTGAAGACGATCTAGATATCGGTGAAGACCTGTTAAAGATATCACAGCGTCGGAATATTGATGAAATTGACGAGGACATCCGGAGCAGAGGAAGCAATGGACCTCCCCATAATACTTCTGAAGTAGATTCAGTTTTGGGTTCAGATCGCCGGGCCCCAACAATTCGATCTGAAGCAAGGCACTCAAGTGAGGGAAGAAGTGAAAGCTGGGAAATCGGGTCTGAGGTCCTTGCCAATTCAACTGTAACTGAAAGCAGAAGCTATGTTGTATCAAAGGAGGTGCGCCAAAAACTTGGGGGTTCTTTCTGA 1293 0.4323 MAPKRVYEAWKGSNKFLFGGRLIFGPDARSLLVTLLLIIVPVIVFCVFVARHLRHEFSSYNAGYAILVVAVLFNIYVLILLFLTSSRDPGVIPRNLHPPEEEFRYDSSVSVEIGGRQTPSLQFPRTKEVMVNGHSVKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFLFVSSATILCIYVFSISAFYIKVLMDHYKGTVWKAMKESPASVILMAYCFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADNRINVYNLGCFNNFLEVFCTKVKPSRNNFRAFVQEEVPRPPPPVISREPEPDLGGGDPRSKVEDDLDIGEDLLKISQRRNIDEIDEDIRSRGSNGPPHNTSEVDSVLGSDRRAPTIRSEARHSSEGRSESWEIGSEVLANSTVTESRSYVVSKEVRQKLGGSF 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01474 430 Pfam DHHC palmitoyltransferase 138 263 IPR001594 GO:0016409
Gma16g01474 430 MobiDBLite consensus disorder prediction 353 402 - -
Gma16g01474 430 ProSiteProfiles DHHC domain profile. 139 189 - -
Gma16g01474 430 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 6 425 - -
Gma16g01474 430 MobiDBLite consensus disorder prediction 381 396 - -
Gma16g01474 430 PANTHER S-ACYLTRANSFERASE 6 425 - -
Gma16g01474 430 MobiDBLite consensus disorder prediction 300 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01474 Gma-Chr16 33974762 33985390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01474 65 334 Lipid Metabolism Gene Families AT4G22750 26.148 3.50e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01474 K16675 - gmx:100795934 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01474 16 33974762 33985390 Gma16g01474 16 33974762 33985390 ECH
Gma16g01474 16 33974762 33985390 Gma02g00719 02 6928650 6934511 GST
Gma16g01474 16 33974762 33985390 Gma10g02132 10 48812174 48816559 PCT
Gma16g01474 16 33974762 33985390 Gma20g01581 20 42906743 42911757 PCT
Gma10g02132 10 48812174 48816559 Gma16g01474 16 33974762 33985390 PCT
Gma20g01581 20 42906743 42911757 Gma16g01474 16 33974762 33985390 PCT