Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01449 ATGGTGGGGTCACCAAATACCTGCATGGATCCTGACGTTCTTGATACATGGTTTTCTGCTGGTCTGTTCCCATTGTCTGTGCTGGGATGGCCTGATGACACAGAGGACCTGAAGACATTCTATCCAACTTCTGTTCTGGAAACTGGCCATGATATCATCTTTTTCTGGGTTGCCCGAATGGTGATGCAAGGATTGAAGTTGGGTGGTGATGTGCCTTTTACAAAGATTTATTTGCATCCCATGGTTCGTGATGCACATGGACGCAAGATGTCCAAGTCCTTAGGGAATGTTGTTGATCCCATTGAAGTGATAAATGGGATATCACTTGAAGGTCTACATAAGAGGTTAGAGGCTGGTAACCTGGACCCCAAAGAACTAGCCATTGCTATAGAGGGTCAGAAGAAGGACTTTCCAAATGGTATTGATGAATGTGGTGTTGATGCTCTCCGTTTTGCACTGGTTTCATACACAGCTCAGTCTGACAAAATTAACCTAGATATTCAAAGGGTGGTTGGGTATCGCCAATGGTGTAATAAACTGTGGAATGCAGTACGATTTGCTATGAGCAAGCTTGGGGATGATTACATCCCTCCTGCCAATTTGATTCCAGATGTTCTCCCATTTAGCTGCAAGTGGATACTCTCAGTGTTAAATAAAACCATATTCAAAACAGTGAAGTCGCTAGAATCATTTGAATTCTCACAAGCTACCACTGCTGTGTATTCTTGGTGGCAGTATCAATTGTGTGATGTATTCATCGAAGTGATTAAGCCTTACTTTACTGGTAATGATCCTAAGTTTGCTTCCGAAAGACGCTTTGCACAAGATACTTTGGAATGCGAGAGAGCAGAATCTATCATGATATGTGATTATCCATCAACTGTAGAGGGCTGGAATAATGAAAAGGTGGAGAATGATATGGACATTATTGAGTCTACTGTTAAGTCTCTCAGGTCACTAGCAAAAGAAAGTTGTGACAGTCTTAGATTTTCTGCTCTGCTTTGTCTAAATATATCTGGAACTCTCACAAATGAGAAAATATTTTCCACACCGGTGGTTACTGAGATTATTAACAGCCACCAACTAGATATTGCAACATTAGCTAATCTATCCTCTTTGACAGTAATCACTGAAAAAGATGCTGTTTCATCTGGATATGCTGATGCTGTTGTAAATGAAAACCTTTCTGTTTATTTAGAGTTTCAAGGAGCTAATTCTGCAGAAGCAGAGGGGAAGATCAAGAAGATAGATGAGCTGCAAAAGCAAATAGAAAGGCTAGAGAAGATGATGAACGCTAAAGGTTATGAAGAGAAGGTTTTGCCAAATATTCGAGAAAAGAACCAGGAGAAGCTAGATTCCCTTAAGCTATTGCTCAAGGAAATGGCTGGTCTGACTCTCTAG 1401 0.409 MVGSPNTCMDPDVLDTWFSAGLFPLSVLGWPDDTEDLKTFYPTSVLETGHDIIFFWVARMVMQGLKLGGDVPFTKIYLHPMVRDAHGRKMSKSLGNVVDPIEVINGISLEGLHKRLEAGNLDPKELAIAIEGQKKDFPNGIDECGVDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFAMSKLGDDYIPPANLIPDVLPFSCKWILSVLNKTIFKTVKSLESFEFSQATTAVYSWWQYQLCDVFIEVIKPYFTGNDPKFASERRFAQDTLECERAESIMICDYPSTVEGWNNEKVENDMDIIESTVKSLRSLAKESCDSLRFSALLCLNISGTLTNEKIFSTPVVTEIINSHQLDIATLANLSSLTVITEKDAVSSGYADAVVNENLSVYLEFQGANSAEAEGKIKKIDELQKQIERLEKMMNAKGYEEKVLPNIREKNQEKLDSLKLLLKEMAGLTL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01449 466 Pfam Anticodon-binding domain of tRNA ligase 211 280 IPR013155 GO:0004812|GO:0006418
Gma20g01449 466 Gene3D - 125 280 - -
Gma20g01449 466 PANTHER VALYL-TRNA SYNTHETASES 279 454 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Gma20g01449 466 PANTHER VALYL-TRNA SYNTHETASES 9 278 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Gma20g01449 466 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 177 396 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Gma20g01449 466 Gene3D HUPs 4 116 IPR014729 -
Gma20g01449 466 SUPERFAMILY Nucleotidylyl transferase 8 174 - -
Gma20g01449 466 Pfam tRNA synthetases class I (I, L, M and V) 10 166 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Gma20g01449 466 PRINTS Valyl-tRNA synthetase signature 10 31 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Gma20g01449 466 PRINTS Valyl-tRNA synthetase signature 41 59 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Gma20g01449 466 Coils Coil 300 320 - -
Gma20g01449 466 Coils Coil 409 436 - -
Gma20g01449 466 CDD Anticodon_Ia_Val 165 278 IPR033705 -
Gma20g01449 466 PANTHER BNAA08G31530D PROTEIN 9 278 - -
Gma20g01449 466 PANTHER BNAA08G31530D PROTEIN 279 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01449 Gma-Chr20 41625223 41628115 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01449 K01873 - gmx:100798111 793.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02267 10 50257452 50265755 Gma20g01449 20 41625223 41628115 GST