Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02395 ATGGTGAAGGAAACCAAGTCTGATTTGAATCCATTGTTCGCGCAGAAGCACAGCCATCATCATGTTCATGTGTTCCTTAAGTTGGCAGTGTCGTGTCTCTTGGTGGGTCTCGCCATTCGCCTCCTCTTCTTCACCGATTCATTCAGCTTGTCATCTGCGGTGCATAATCCTCCTCCTCTTGCAGCTAACGCAATAGTACAGTTACCCATTCTTTCTTTTCCCTCTCCGCCCCCTCCTTCTCCTTCTCTTCATTTTCCGCCAAACCAGACCCAAACCTCTCCCCGAGATGCAGAGAAGTGTGATCTTTTTGTGGGAGATTGGGTGCCGGACCCAAATGGTCCAATGTACACTAATGAGAGCTGCCGTGTGATTGAAGATCATCAAAACTGCATGAGGAATGGACGTCCTGATTCGGGGTACCTTTATTGGAGGTGGAACCCAAGGGGTTGTCAATTACCCAAGTTCAGTCCAAAGAAATTCCTTGACATGATGAGGGATAAATCATGGGCCTTTATTGGTGATTCCATCTCTCGCAACCATGTGCAATCTTTACTTTGCATTCTTTCCCAGGTGGAAGCAGCTGATGAGGTGTACCATGATGAGGAATATAGATCAAAGATATGGAAGTTCCCTTCCCACAACTTCACACTCTCAGTGATATGGGCTCCTTTCCTTATCAAAGCAGATATCTTTGAGGACATGAATGGAGTTTCCTCTTCAGAAATACAGCTTTATCTGGACACTCTGGACGACAAATGGACCAACCAATACAAGAATTTTGACTATGTTGTAATCGCAGGTGGCAAATGGTTTCTCAAGACAGCAATATACCATGAAAACAACACTTTAACAGGCTGCCACAACTGCCATGGAAAGAATTTAACCGAGGTGGGATTCGAACACGCGTACCGCAAAGCATTGCAGCAGGTTTTTGACTTCATGACACACTCAGAACACAAAGCGGTTGTCTTCTTCAGAACCACCACACCAGACCACTTTGAGAATGGGGAATGGTTCAGCGGAGGGTACTGCAATAGGACAGTGCCCTTCAAAGAGGACCAGGTAGAAGTGAGTTATGTTGATTCCATCATCAGAGGCATTGAACTTGAAGAGTTTCACAAGACTAAGAATTCAAGTGCCAACAACTTGAAACTTTTGGACACAACTGGGCTCTCACTGTTGAGGCCCGATGGGCATCCAGGTCCATATCGCCAGTTCCATCCAAAGCCCAATGCGAAGAAGGTCCAGAATGATTGCCTGCACTGGTGTCTGCCAGGCCCAATTGATTCCTGGAACGACATAGTTTTGCAAATGCTGACAATGTGA 1326 0.4615 MVKETKSDLNPLFAQKHSHHHVHVFLKLAVSCLLVGLAIRLLFFTDSFSLSSAVHNPPPLAANAIVQLPILSFPSPPPPSPSLHFPPNQTQTSPRDAEKCDLFVGDWVPDPNGPMYTNESCRVIEDHQNCMRNGRPDSGYLYWRWNPRGCQLPKFSPKKFLDMMRDKSWAFIGDSISRNHVQSLLCILSQVEAADEVYHDEEYRSKIWKFPSHNFTLSVIWAPFLIKADIFEDMNGVSSSEIQLYLDTLDDKWTNQYKNFDYVVIAGGKWFLKTAIYHENNTLTGCHNCHGKNLTEVGFEHAYRKALQQVFDFMTHSEHKAVVFFRTTTPDHFENGEWFSGGYCNRTVPFKEDQVEVSYVDSIIRGIELEEFHKTKNSSANNLKLLDTTGLSLLRPDGHPGPYRQFHPKPNAKKVQNDCLHWCLPGPIDSWNDIVLQMLTM 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02395 441 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 26 61 439 - -
Gma19g02395 441 Pfam PMR5 N terminal Domain 98 151 IPR025846 -
Gma19g02395 441 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 152 438 IPR026057 GO:0016740
Gma19g02395 441 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 61 439 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02395 Gma-Chr19 52516433 52519655 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02395 - - gmx:100795653 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02395 19 52516433 52519655 Gma19g02395 19 52516433 52519655 ECH
Gma19g02395 19 52516433 52519655 Gma07g00538 07 5189163 5192558 PCT
Gma19g02395 19 52516433 52519655 Gma16g00239 16 2584003 2587872 PCT
Gma07g00538 07 5189163 5192558 Gma19g02395 19 52516433 52519655 PCT
Gma16g00239 16 2584003 2587872 Gma19g02395 19 52516433 52519655 PCT