Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00239 ATGGTGAAGAGAGTGAGGTCTGATTCGGGTCCATTGTCTCTGCAAAAGCACAACCATTGGTGTGTGAAGTTAGGAGTTTCAATCTTCTTGGTGGGTCTCGCTTTTCGTCTTCTCTTGTGGGATTCATTCAGTTTCTCATCGGTGGTGGTGGAGACACCTCCTCCTCTGGAAGATGCAAAAGCAGTGTCCCCTGTTTTCTCTTCCTCTGTTCTTCAGGATTCTGATGAGTTTCCAGAAAATGATCAGAAGATTCAGACACAAATCTCTAAGAATGAAAAATGTGATCTTTTTGTGGGAGATTGGGTGCAAGACCTATCTGGGCCAGTGTACACCAATGAGAGCTGCCGTGTGATTGAGCCTCATCAAAATTGTATGAAGAATGGACGTCCTGATTCAGAGTACCTCTACTGGAGGTGGACCCCACGAGACTGTAAATTGCCCAAATTCAATCCCAGAAAGTTTCTCAAACTCATGAGAAACAAATCATTGTCATTCATTGGTGATTCCATCTCCCGCAACCAAGTTCAGTCCCTACTTTGCGTTCTCTCAAAGGTGGAACCAGCTGTTGAGATCTACCATGACAAGGAATATAGATCAAAGATATGGAAATTTCGTTCTCACAACTTCACACTCTCAGTAATCTGGACCCCTTTCCTTGTCAAAGCAGCTATATTTGAGGACTTCAATGGAGTTACCTCTTCAGAGATACAGCTTTATCTCGACACACTCGACGAGTGGACCAAACAGTATAAGAATTTTGATTATGTTGTCATTGGTGGTGGAAAATGGTTTCTCAAGACTGCAATCTACCATGAAAACAAAACAGTCATAGGCTGCCACTACTGCCCTGGAAAGAACTTAACAGAGCTGGGATTCGACTACGCGTACCGCAAAGTACTACAAGAAGTTTTCAAGTTCTTCACAAAGTCTAACCACAAAGCCACTGTTCTCTTCAGAACCACCACACCAGACCACTTTGAGAATGGGGAGTGGTTTAGTGGAGGGTATTGCAATAGAACTGTGCCCTTCAAAGAGGGTCAGATACATATGATAGACGTAGATTCCATCATGAGAAGTATTGAACTTGAAGAGTTTGAGAAGGCTGCTTCTCTAGGATCCAAAAGGGTGAACTTGAAACTTTTGGACACAACTCTTCTTTCACTGCTGAGACCAGATGGACATCCTGGACCTTACAGGAAGTTCCAGCCATTTGCAAAAGATAAGAATGCTAAAGTTCAGAATGATTGTCTACATTGGTGTTTGCCAGGACCAATCGACTCATGGAATGACATAATCATGCAAATGCTACTCAATGCTTAA 1320 0.4295 MVKRVRSDSGPLSLQKHNHWCVKLGVSIFLVGLAFRLLLWDSFSFSSVVVETPPPLEDAKAVSPVFSSSVLQDSDEFPENDQKIQTQISKNEKCDLFVGDWVQDLSGPVYTNESCRVIEPHQNCMKNGRPDSEYLYWRWTPRDCKLPKFNPRKFLKLMRNKSLSFIGDSISRNQVQSLLCVLSKVEPAVEIYHDKEYRSKIWKFRSHNFTLSVIWTPFLVKAAIFEDFNGVTSSEIQLYLDTLDEWTKQYKNFDYVVIGGGKWFLKTAIYHENKTVIGCHYCPGKNLTELGFDYAYRKVLQEVFKFFTKSNHKATVLFRTTTPDHFENGEWFSGGYCNRTVPFKEGQIHMIDVDSIMRSIELEEFEKAASLGSKRVNLKLLDTTLLSLLRPDGHPGPYRKFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDIIMQMLLNA 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00239 439 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 26 59 437 - -
Gma16g00239 439 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 59 437 IPR029962 GO:0016413
Gma16g00239 439 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 146 435 IPR026057 GO:0016740
Gma16g00239 439 Pfam PMR5 N terminal Domain 92 145 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00239 Gma-Chr16 2584003 2587872 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00239 - - gmx:100794524 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00239 16 2584003 2587872 Gma16g00239 16 2584003 2587872 ECH
Gma07g00538 07 5189163 5192558 Gma16g00239 16 2584003 2587872 GST
Gma19g02395 19 52516433 52519655 Gma16g00239 16 2584003 2587872 PCT
Gma16g00239 16 2584003 2587872 Gma19g02395 19 52516433 52519655 PCT