Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02152 ATGGGTTGTGGCGGTGCATTCTCAGTGTGGCTGCCAGTGTTTGTGTCTTGTTTTACAGCAATAGCATTGGCTGGGACTGGGTGCGATAAGGCACCGGTGGTGTTCGTGTTCGGCGATTCGAACTCGGACACGGGTGGACTCGCTTCCGGTCTGGGTTTCCCTATCAATCTTCCCAATGGCCGCAATTTCTTTCACAGATCCACTGGCCGCTTGTCCGATGGACGCCTCGTCATCGACCTACTCTGCCAAAGTTTGAATGCAAGTTTGTTGGTACCATATTTGGACGCCTTGTCTGGAACCTCATTCACAAATGGAGCAAACTTTGCAGTGGTGGGGTCCTCTACTCTCCCAAAATATGTTCCTTTCTCCCTCAATATACAGGTCATGCAGTTCCGGCGTTTCAAAGCTCGTTCCCTTGAACTTGTTACCACAGGTACAAGAAATTTGATCAATGATGAAGGCTTCCACGGTGCACTCTACTTGATTGATATTGGGCAAAACGACCTTGCTGATTCATTTGCCAAAAATCTGTCATATGTGCAAGTCATCAAGAAGATCCCAGTAGTTATAACTGAAATTGAGAATGCTGTTAAGAGTTTATATAATGAAGGTGCCAGGAAATTTTGGGTTCACAATACTGGGCCGTTGGGCTGTCTTCCAAAAGTACTTGCACTGGCTCAGAAGAAGGATCTAGATTCATTGGGATGTCTTTCTAGTTATAACTCTGCAGCAAGATTGTTTAATGAAGCCCTGCTTCATTCAAGTCAGAAACTAAGATCTGAACTTAAGGATGCTACTTTAGTCTATGTTGATATTTATGCCATTAAGTATGATCTCATCACAAATGCCGCGAAATATGGTTTCTCAAATCCGTTGATGGTATGTTGCGGTTATGGAGGACCACCTTACAATTTTGATGTAAGGGTGACATGTGGTCAACCTGGTTATCAGGTTTGTGATGAAGGGGCTCGGTATGTGAGCTGGGATGGAATTCATCAAACTGAGGCTGCAAATACATTGATAGCTTCTAAGATACTTTCCATGGCTTATTCCACACCACGGATTCCTTTTGATTTCTTCTGCCACCACTGA 1092 0.4441 MGCGGAFSVWLPVFVSCFTAIALAGTGCDKAPVVFVFGDSNSDTGGLASGLGFPINLPNGRNFFHRSTGRLSDGRLVIDLLCQSLNASLLVPYLDALSGTSFTNGANFAVVGSSTLPKYVPFSLNIQVMQFRRFKARSLELVTTGTRNLINDEGFHGALYLIDIGQNDLADSFAKNLSYVQVIKKIPVVITEIENAVKSLYNEGARKFWVHNTGPLGCLPKVLALAQKKDLDSLGCLSSYNSAARLFNEALLHSSQKLRSELKDATLVYVDIYAIKYDLITNAAKYGFSNPLMVCCGYGGPPYNFDVRVTCGQPGYQVCDEGARYVSWDGIHQTEAANTLIASKILSMAYSTPRIPFDFFCHH 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02152 363 Gene3D SGNH hydrolase 29 351 IPR036514 -
Gma19g02152 363 PANTHER OS01G0329900 PROTEIN 14 362 - -
Gma19g02152 363 CDD SGNH_plant_lipase_like 32 347 IPR035669 -
Gma19g02152 363 Pfam GDSL-like Lipase/Acylhydrolase 34 345 IPR001087 GO:0016788
Gma19g02152 363 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 14 362 - -
Gma19g02152 363 SUPERFAMILY SGNH hydrolase 34 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02152 Gma-Chr19 50392297 50396275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02152 31 352 Acyl Lipid Metabolism Gene Families AT4G10950 27.405 1.35e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02152 - - gmx:100797617 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02152 19 50392297 50396275 Gma03g02117 03 46707244 46710495 ECH
Gma19g02152 19 50392297 50396275 Gma19g02152 19 50392297 50396275 ECH
Gma19g02152 19 50392297 50396275 Gma03g02117 03 46707244 46710495 GST