Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02117 ATGATGGGTTGTGGCGGTGCAATCTCAGTGTCACTGCTGCTGCTTCTCTCTTGTTTTACAGAAATAGCCTTGGCTGGCTGCGATAAGGCTCCAGTGCTGTTCGTCTTCGGCGATTCCAACTCGGACACGGGTGGACTCGCCTCCGGACTCGGTTTCCCTATAAATCCTCCCAATGGCCGCAATTTCTTTCACAGATCCACTGGCCGCTTGTCCGATGGTCGCCTCCTCATCGACCTACTCTGCCTGAGTTTGAATGCAAGTTTGTTGGTACCATACTTGGACGCCTTGTCTGGAACCTCATTCACAAATGGAGCAAACTTTGCAGTGGTGGGGTCCTCTACTCTCCCAAAATATGTTCCTTTCTCCCTCAATATACAGGTCATGCAGTTCCGGCGTTTCAAAGCTCGCTCCCTTGAACTTGTTACCGCAGGTGCAAGAAATTTGATCAATGATGAAGGCTTCCGTGATGCACTCTACTTGATTGATATTGGACAAAATGACCTTGCTGATTCATTTGCCAAAAATCTGTCATATGCGCAAGTCATCAAGAAAATCCCAGCAGTTATAACTGAAATTGAGAATGCTGTTAAGAATTTATATAATGATGGTGCCAGGAAGTTTTGGGTTCACAATACTGGGCCGTTGGGCTGTCTTCCAAAAATACTCGCACTGGCTCAGAAGAAGGATCTAGATTCATTGGGATGTCTTTCTAGTTATAACTCTGCAGCAAGATTGTTTAATGAAGAGCTGCTTCATTCAACTCAGAAACTAAGATCTGAACTGAAAGATGCTACTTTAGTCTATGTTGATATTTATACCATTAAGTATGACCTCATCACAAATGCCGCGAAATATGGTTTCTCGAATCCGTTGATGGTATGTTGCGGCTATGGAGGGCCTCCTTACAATTTTGACGTAAGGGTGACATGTGGTCAACCTGGTTATCAGGTTTGTGATGAAGGGGCTCGGTATGTGAGTTGGGATGGAATTCATCAAACTGAGGCTGCAAATACATTGATAGCTTCTAAGATACTTTCCATGGCTTATTCCACACCACGGACACCTTTTGATTTCTTCTGCCACCAATGA 1089 0.4472 MMGCGGAISVSLLLLLSCFTEIALAGCDKAPVLFVFGDSNSDTGGLASGLGFPINPPNGRNFFHRSTGRLSDGRLLIDLLCLSLNASLLVPYLDALSGTSFTNGANFAVVGSSTLPKYVPFSLNIQVMQFRRFKARSLELVTAGARNLINDEGFRDALYLIDIGQNDLADSFAKNLSYAQVIKKIPAVITEIENAVKNLYNDGARKFWVHNTGPLGCLPKILALAQKKDLDSLGCLSSYNSAARLFNEELLHSTQKLRSELKDATLVYVDIYTIKYDLITNAAKYGFSNPLMVCCGYGGPPYNFDVRVTCGQPGYQVCDEGARYVSWDGIHQTEAANTLIASKILSMAYSTPRTPFDFFCHQ 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02117 362 Pfam GDSL-like Lipase/Acylhydrolase 33 344 IPR001087 GO:0016788
Gma03g02117 362 Gene3D SGNH hydrolase 24 350 IPR036514 -
Gma03g02117 362 CDD SGNH_plant_lipase_like 31 346 IPR035669 -
Gma03g02117 362 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 9 361 - -
Gma03g02117 362 PANTHER OS01G0329900 PROTEIN 9 361 - -
Gma03g02117 362 SUPERFAMILY SGNH hydrolase 33 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02117 Gma-Chr3 46707244 46710495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02117 30 351 Acyl Lipid Metabolism Gene Families AT4G10950 26.822 2.94e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02117 - - gmx:100790553 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02152 19 50392297 50396275 Gma03g02117 03 46707244 46710495 ECH
Gma03g02117 03 46707244 46710495 Gma03g02117 03 46707244 46710495 ECH
Gma19g02152 19 50392297 50396275 Gma03g02117 03 46707244 46710495 GST