Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02107 ATGACATCCTCAGTTCCCTTGGTCTCCACCCTATTGCTTTGCTCTATTGCTCTTCTCTACTCTGCATCATTTGGAGCTGAAGCATGGACCTCGCCCTACATACCCGTCTCTTCGCTCATCAGCAAAAGTCTTTATGACAAATTTTTCCTTCACAAAGATGACACTGCATGCCCAGCCAAAGACTTCTACCCCTACGACGCCTTCATTCGTGCATCCAAATCCTTCCCTGCATTTGGTACCACCGGATGTTTAGCAACACGCAAGCGTGAGATTGCTGCGTTTCTCGCTCAGATTTCCCACGAAACCACTGGCGGCTGGGCCACCGCACCCGACGGCCCATTTGCATGGGGTCTCTGCTTCAAGGAAGAAATTAGTCCTCAGAGTAATTACTGTGATTCTACTAACACCCAATGGCCTTGTTTCCCAGGCAAAAGCTACAAGGGTAGAGGACCCATTCAACTTTCTTGGAACTACAACTATGGTCCAGCAGGGAAGGCTTTGGGATTTGATGGGCTGAGGAACCCAGAGATTGTGGCGAACAATTCTGTGATAGCCTTCAAAACTGCTATGTGGTTTTGGATGACAGAGCAAAAGCCAAAACCTTCATGCCACAATGTGATGGTTGGGATATATGTGCCGACAGAAGATGACATAGCAGCAAACCGAACAGCGGGTTATGGTTTGGTGACTAACATAATCAATGGTGGACTGGAATGTGGGATTCCTGGTGATGCAAGAGTGAATGATCGGATTGGGTTTTTCGAAAGGTATACGAAGTTGTTCAACGTGGACACTGGACCTAACTTGGATTGTGCATATCAGAAACCCTTCTAA 834 0.4736 MTSSVPLVSTLLLCSIALLYSASFGAEAWTSPYIPVSSLISKSLYDKFFLHKDDTACPAKDFYPYDAFIRASKSFPAFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEISPQSNYCDSTNTQWPCFPGKSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVANNSVIAFKTAMWFWMTEQKPKPSCHNVMVGIYVPTEDDIAANRTAGYGLVTNIINGGLECGIPGDARVNDRIGFFERYTKLFNVDTGPNLDCAYQKPF 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02107 277 Gene3D - 43 277 - -
Gma19g02107 277 ProSitePatterns Chitinases family 19 signature 2. 184 194 IPR000726 GO:0004568|GO:0006032|GO:0016998
Gma19g02107 277 PANTHER OS05G0138200 PROTEIN 6 277 - -
Gma19g02107 277 PANTHER CHITINASE-RELATED 6 277 - -
Gma19g02107 277 CDD chitinase_GH19 40 271 - -
Gma19g02107 277 SUPERFAMILY Lysozyme-like 36 277 IPR023346 -
Gma19g02107 277 PIRSF Endochitinase 8 277 IPR016283 GO:0004568|GO:0005975
Gma19g02107 277 Pfam Chitinase class I 39 271 IPR000726 GO:0004568|GO:0006032|GO:0016998
Gma19g02107 277 Gene3D Endochitinase, domain 2 122 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02107 Gma-Chr19 49937116 49938964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02107 35 277 Glycoside Hydrolase AT4G01700 75.720 1.15e-148 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02107 - - gmx:100784196 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02107 19 49937116 49938964 Gma10g01373 10 40544609 40545907 PCT
Gma19g02107 19 49937116 49938964 Gma02g00067 02 785200 786847 PCT
Gma10g01373 10 40544609 40545907 Gma19g02107 19 49937116 49938964 PCT
Gma02g00067 02 785200 786847 Gma19g02107 19 49937116 49938964 PCT