Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01373 ATGGCATTCTCATTCCCCTCAAAGGATAACAATGCATGCCCTGCCAGAAACTTCTACACCTACGACTCCTTCATCAATGCATCCAAACGCTTCCCTAGATTTGGCACCACTGGTAGTCCAACCACGCCCAAGCGTGAGATTGCAGCCTTTCTTGCTCAGATTTCACATGAAACCACAGGTGGGTGGGCCACAGCACCTGATGGACCCTATGCTTGGGGACTGTGCTTCAAGGAAGAAATTAGCCCTCAAAGTCACTATTGTGATTCCACCAACACTCAATGGCCTTGTTATCCTGGACAAAGTTACAAAGGCAGAGGGCCAATTCAACTTTCATGGAACTACAACTATGGACCAGCAGGGAAGGCTTTGGGATTTGATGGATTGAGAAACCCAGATGTGGTGTCAAACAATTCACTGTTTGCCTTTCAAACAGGGTATGGCTTTGTGACTAACATAATCAATGGTGGACTTGAATGTGGAATTCCTGATGATTCAAGGGTGAATGATAGGATTGGATACTTTCAAAGATATGCAACCATGTTTAACGTAGATACAGGACCTAACTTGGACTGTGCAAATCAGAAGTCTTTCTAA 594 0.4478 MAFSFPSKDNNACPARNFYTYDSFINASKRFPRFGTTGSPTTPKREIAAFLAQISHETTGGWATAPDGPYAWGLCFKEEISPQSHYCDSTNTQWPCYPGQSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPDVVSNNSLFAFQTGYGFVTNIINGGLECGIPDDSRVNDRIGYFQRYATMFNVDTGPNLDCANQKSF 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01373 197 Pfam Chitinase class I 8 144 IPR000726 GO:0004568|GO:0006032|GO:0016998
Gma10g01373 197 SUPERFAMILY Lysozyme-like 5 197 IPR023346 -
Gma10g01373 197 CDD chitinase_GH19 5 191 - -
Gma10g01373 197 PIRSF Endochitinase 3 145 IPR016283 GO:0004568|GO:0005975
Gma10g01373 197 PIRSF Endochitinase 143 197 IPR016283 GO:0004568|GO:0005975
Gma10g01373 197 PANTHER CHITINASE-RELATED 144 197 - -
Gma10g01373 197 PANTHER CHITINASE 10 5 144 - -
Gma10g01373 197 Gene3D - 1 191 - -
Gma10g01373 197 Gene3D Endochitinase, domain 2 79 132 - -
Gma10g01373 197 ProSitePatterns Chitinases family 19 signature 1. 13 35 IPR000726 GO:0004568|GO:0006032|GO:0016998
Gma10g01373 197 PANTHER CHITINASE-RELATED 5 144 - -
Gma10g01373 197 PANTHER CHITINASE 10 144 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01373 Gma-Chr10 40544609 40545907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01373 5 197 Glycoside Hydrolase AT1G02360 64.192 1.73e-108 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01373 - - gmx:100780573 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01373 10 40544609 40545907 Gma02g00067 02 785200 786847 GST
Gma19g02107 19 49937116 49938964 Gma10g01373 10 40544609 40545907 PCT
Gma10g01373 10 40544609 40545907 Gma19g02107 19 49937116 49938964 PCT