Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02103 ATGGCTAACCCAACACAACCTAATGTTGGGTTCACCCCTGAGAGAGAGAGTTCAAACCCTGAGAAGAGTCCAATTCCGCCCCCTCCAAGTTTTGTAGCCTCACCACCTGGTTTTCCTCCACCAAAATTGCATTTACAGCAAGATCAAGCTTCTTCCCGTTCCGTTAAAACCCCAAACGTTTTATCACCAGCCAATGGGGTTACCACTGGCAGTCCTGTTCCTCACTTGAGCACCCCTCCTGGACCCCCAGTTTTTACGTCGCCGGTCCGTCCAGCTGCTGTTCCGTTTCGTACGTCGCCTGCATCACCTCAGCCACTTGCATTTTCTTCCGCCTCTTCTTTGCCAACATCATCATCGCCGCTGCAATTTTCAAATGGATCGTTTGAGTCGCAGCACCAAGTTTCTGATAGTATAGAGGACCATGTTCCCTTGGGAGAGTCATCCTTTGTTCTCTTTTCAGCTCATAAGGTATTGAAACGGAAGAAACAAGCTAATGTACCCAGTTTGGGTTTTGGGGCATTGGTCTCTCCTGGGAGGGAGGTTTCAATGGGCCCTCAGATAATACAGCGTGACCCTCATCGCTGCCAAAGCTGTGGTGCTTATGCTAATATATATTGCAACATATTGCTTGGATCAGGCCAGTGGCAGTGTGTTATATGTCGGAAACTGAATGGAAGTGAGGGGGAGTACATTGCGCACAGCAAGGAAGATCTTCACAGATTTCCGGAATTATCTTCACCCATGTTTGACTATGTTCAAACTGGGAACAAGAGACCTGGTTTTGTTCCAGTTTCAGATTCCAGAATGTCTGCCCCAATTGTTCTTGTTATAGATGAATGTTTAGATGAACCTCATCTACACCATCTACAGAGTTCTTTGCATGCTTTTGTTGATTCTCTCCCGCCAATAACTAGATTAGGAATTATACTATATGGTCGTACTGTATCAGTGTATGATCTTTCAGAAGAGGCTATGGCATCTGCTGATGTGCTTCCTGGGGACAAATCACCAAGTCAAGAATCTTTGAAAGCATTGATTTATGGTACTGGTATATACTTGTCACCAATGCATGCTTCGCTGGCTGTTGCACATTCCATATTTTCATCATTGAGGGCATATAAATTGAATGTACCAGAAGTTTCTCGTGATCGGTGCCTAGGAACTGCTGTTGAGGTTGCTCTTGCTATAATTCAGGGCCCATCTGCTGATCTGTCCCGGGGGGTGGTCAAAAGGTCAGGGGGAAATAGTAGAATTATTGTCTGTGCTGGCGGACCAAACACTTATGGGCCTGGATCTGTTCCTCATTCTTTTAGTCACCCTAATTATCCTTACATGGAAAAGACAGCAATTAAATGGATGGAGAATCTTGGTTGTGAGGCTCATCGACACAATACTATAATTGATATTTTATGTGCTGGAACATGCCCTGTAAGAGTTCCTATCTTACATCCTCTTGCAAAAACATCAGGTGGAGTTTTGGTTCTCCATGATGATTTTGGGGAAGCCTTTGGTGTTAATTTGCAAAGGGCATCTGCCAGATCAGCAGGCTCTCATGGTTTGTTAGAATTGCGCACGTCAGATGATATTCTCATTACTCAAGTTGTTGGTCCTGGGGAAGAGTCACATGTAGATACCCATGAAACATTTAAAAATGACACTGCTCTTTATATTCAAATGCTAAGTGTTGAGGAAACACAAAGTTTCTCTCTCTCCATGGAAACTGAAGGAGATATCAAAAGTGATTTTGTCTTTTTTCAATTTGCAATTCAGTATTCAAATGTGTATCAAGCTGATGTGTCGAGGGTCATTACTGTTAGACTGCCAACGGTAGATAGTATTTCTGCATATCTTGAGAGTGTTCAGGATGAAGTGGCCGCTGTACTCATTGCAAAAAGAACCCTGTTACGAGCCAAAAACCATTCTGATGCAATTGATATGCGAGCAACAATAGACGAAAGAATCAAGGATATTGCTCTAAAATTTGGCTCCCAATTACCTAAATCTAAACTTCATAGCTTCCCTAAGGAGCTTTCTCTCCTACCGGAGCTCCTTTTCCATCTCAGGAGAGGACCACTATTGGGAAGCATTATTGGCCATGAAGATGAGAGGTCTGTGCTGAGAAACTTGTTTCTGAATGCATCCTTTGATCTATCACTCAGAATGGTAGCTCCTCGTTGTCTAATGCACAGGGAGGGGGGAACTTTTGAGGAGCTACCGGCGTATGATCTTGCTATGCAGTCTGATGCTGCTGTTGTACTTGACCATGGCACTGATGTCTTCATTTGGTTGGGTGCTGAACTAGCAGCTGATGAAGGAAGAAGTGCTGCTGCTCTAGCTGCATGTAGGACATTGGCTGAAGAACTGACTGAATACCGTTTTCCAGCACCTCGAATCCTTGCATTTAAGGAGGGTAGCTCCCAGGCTCGATATTTTGTCTCTCGTCTCATTCCTGCTCACAAGGATCCTCCTTATGAGCAGGAGGCAAGATTCCCACAACTGAGGTCGTTGACATCAGAACAGCGAACAAAGCTGAAAGCCAGTTTTGTTCACTTCGACGATCCTAGTTTCTGTGAATGGATGCGAAGTTTGAAAGTGGTGCCACCACAACCAAGGTCAACCGTGACGCCACAATCGCCTTCGGCATCTTTGCAACGGGATCAGCAATCCGGTGCGAAGAAGAAGGAGGTGAAGAAGGAAACTGGCTTAGGTCTCACGCATCGGAAGGCGGAGAACTTCGGAGAGTGGTATTCCGAGGTGGTTGTTAATGCGGAAATGATTGAGTACTATGATATTTCCGGTTGCTATATTCTGAGGCCTTGGTCAATGGCAATATGGGAGATCATGCAAGAGTTTTTCGATCCAGAAATAAAGAAAATGAAAATCAAGAACTGCTACTTCCCATTGTTTGTATCTCCTGGAGTTCTGCAAAAGGAGAAGGACCACGTTGAGGGTTTTGCTCCTGAGGTTGCTTGGGTGACAAAGTCTGGGGAATCCGAATTAGAAATTCCTATAGCTATTCGTCCTACTAGTGAAACAGTGATGTATCCCTACTACTCTAAGTGGATAAGGGGACATCGTGACTTGCCTTTGAAACTTAATCAGTGGTGCAATGTTGTAAGATGGGAGTTCAGCAACCCCACTCCATTCATCAGGTATCGCGAGTTTCTTTGGCAAGAAGGGCACACTGCTTTTGCAACAAAGGATGAAGCAGATGCAGAGGTTCTTGAGATTCTGGAATTATATAGGCGTATATACGAAGAGTATTTGGCAGTTCCTGTCATAAAGGGTAAGAAAAGTGAGCTTGAGAAGTTTGCTGGTGGACTCTACACTACCAGTGTTGAGGCATTTATTCCAAACACTGGTCGTGGTATCCAAGGTGCAACTTCTCATTGTTTGGGCCAAAATTTTGCTAAAATGTTTGAGATAAACTTTGAAAATGAAAAGGGAGAGAAAGCAATGGTCTGGCAGAATTCATGGGCCTATAGTACTCGAACTATTGGGGTCATGGTGATGGTTCATGGTGATGACAAGGGATTGGTACTACCTCCTAAAGTAGCATCAGTACAAGTTATTGTGATTCCTGTGCCTTACAAAGATGCCGATACTCAAGGAATCTTTGATGCCTGTTCTGCAACTGTGAATACATTGAATGAAGCAGGTATTCGCGCTGAGTCAGATTCTAGAGATAATTATTCTCCTGGATGGAAGTATTCCAACTGGGAAATGAAAGGGGTTCCTCTAAGAATTGAAATTGGGCCAAAGGATTTAGCAAATAAGCAGGTTCGCGCTGTTCGACGTGATAATGGTGCAAAGATAGACATTGCTAGTGCTGATTTGGTTGTGGAAATAAAAAAGTTGCTCGATACTATTCAACAGAACCTGTTTGATGTTGCAAAACAAAAACGAGATGAATGCATTCAGATCATACACACTTGGGATGAATTTGTGCAAGCTTTGAACCAAAGAAAAATGATCTTAGCTCCTTGGTGTGACGAGGAGGAGGTTGAGGCTGATGTCAAAGCGAGGACAAAGGGTGAGATGGGAGCAGCTAAGACTCTTTGCAGTCCCTTTGATCAGCCAGAACTCCCAGAAGGCACCAAGTGCTTTGCATCAGGAAAGCCTGCAACAAAGTGGACATACTGGGGAAGAAGTTACTAG 4158 0.4413 MANPTQPNVGFTPERESSNPEKSPIPPPPSFVASPPGFPPPKLHLQQDQASSRSVKTPNVLSPANGVTTGSPVPHLSTPPGPPVFTSPVRPAAVPFRTSPASPQPLAFSSASSLPTSSSPLQFSNGSFESQHQVSDSIEDHVPLGESSFVLFSAHKVLKRKKQANVPSLGFGALVSPGREVSMGPQIIQRDPHRCQSCGAYANIYCNILLGSGQWQCVICRKLNGSEGEYIAHSKEDLHRFPELSSPMFDYVQTGNKRPGFVPVSDSRMSAPIVLVIDECLDEPHLHHLQSSLHAFVDSLPPITRLGIILYGRTVSVYDLSEEAMASADVLPGDKSPSQESLKALIYGTGIYLSPMHASLAVAHSIFSSLRAYKLNVPEVSRDRCLGTAVEVALAIIQGPSADLSRGVVKRSGGNSRIIVCAGGPNTYGPGSVPHSFSHPNYPYMEKTAIKWMENLGCEAHRHNTIIDILCAGTCPVRVPILHPLAKTSGGVLVLHDDFGEAFGVNLQRASARSAGSHGLLELRTSDDILITQVVGPGEESHVDTHETFKNDTALYIQMLSVEETQSFSLSMETEGDIKSDFVFFQFAIQYSNVYQADVSRVITVRLPTVDSISAYLESVQDEVAAVLIAKRTLLRAKNHSDAIDMRATIDERIKDIALKFGSQLPKSKLHSFPKELSLLPELLFHLRRGPLLGSIIGHEDERSVLRNLFLNASFDLSLRMVAPRCLMHREGGTFEELPAYDLAMQSDAAVVLDHGTDVFIWLGAELAADEGRSAAALAACRTLAEELTEYRFPAPRILAFKEGSSQARYFVSRLIPAHKDPPYEQEARFPQLRSLTSEQRTKLKASFVHFDDPSFCEWMRSLKVVPPQPRSTVTPQSPSASLQRDQQSGAKKKEVKKETGLGLTHRKAENFGEWYSEVVVNAEMIEYYDISGCYILRPWSMAIWEIMQEFFDPEIKKMKIKNCYFPLFVSPGVLQKEKDHVEGFAPEVAWVTKSGESELEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRYREFLWQEGHTAFATKDEADAEVLEILELYRRIYEEYLAVPVIKGKKSELEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAKMFEINFENEKGEKAMVWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYKDADTQGIFDACSATVNTLNEAGIRAESDSRDNYSPGWKYSNWEMKGVPLRIEIGPKDLANKQVRAVRRDNGAKIDIASADLVVEIKKLLDTIQQNLFDVAKQKRDECIQIIHTWDEFVQALNQRKMILAPWCDEEEVEADVKARTKGEMGAAKTLCSPFDQPELPEGTKCFASGKPATKWTYWGRSY 1385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02103 1385 MobiDBLite consensus disorder prediction 45 74 - -
Gma19g02103 1385 Hamap Proline--tRNA ligase [proS]. 905 1385 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Gma19g02103 1385 Pfam Sec23/Sec24 beta-sandwich domain 518 609 IPR012990 -
Gma19g02103 1385 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 59 870 IPR037364 -
Gma19g02103 1385 MobiDBLite consensus disorder prediction 868 887 - -
Gma19g02103 1385 CDD ProRS_anticodon_zinc 1178 1385 - -
Gma19g02103 1385 MobiDBLite consensus disorder prediction 868 902 - -
Gma19g02103 1385 Pfam Sec23/Sec24 zinc finger 192 230 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Gma19g02103 1385 Gene3D - 183 245 - -
Gma19g02103 1385 SUPERFAMILY beta-sandwich domain of Sec23/24 34 620 - -
Gma19g02103 1385 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 1004 1170 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Gma19g02103 1385 Gene3D Sec23/Sec24 helical domain 610 730 - -
Gma19g02103 1385 SUPERFAMILY C-terminal domain of ProRS 1308 1385 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Gma19g02103 1385 SUPERFAMILY Zn-finger domain of Sec23/24 186 255 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Gma19g02103 1385 CDD gelsolin_like 724 815 - -
Gma19g02103 1385 Pfam Prolyl-tRNA synthetase, C-terminal 1312 1385 IPR016061 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Gma19g02103 1385 PRINTS Prolyl-tRNA synthetase signature 1004 1015 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Gma19g02103 1385 PRINTS Prolyl-tRNA synthetase signature 1044 1055 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Gma19g02103 1385 PRINTS Prolyl-tRNA synthetase signature 963 981 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Gma19g02103 1385 PRINTS Prolyl-tRNA synthetase signature 1034 1042 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Gma19g02103 1385 CDD trunk_domain 266 509 - -
Gma19g02103 1385 Pfam Sec23/Sec24 helical domain 623 719 IPR006900 GO:0006886|GO:0006888|GO:0030127
Gma19g02103 1385 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 724 864 IPR036180 -
Gma19g02103 1385 TIGRFAM proS_fam_I: proline--tRNA ligase 907 1385 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Gma19g02103 1385 Gene3D - 1183 1303 IPR036621 -
Gma19g02103 1385 SUPERFAMILY vWA-like 273 505 IPR036465 -
Gma19g02103 1385 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 59 870 - -
Gma19g02103 1385 Gene3D von Willebrand factor, type A domain 272 517 IPR036465 -
Gma19g02103 1385 MobiDBLite consensus disorder prediction 888 902 - -
Gma19g02103 1385 Pfam Sec23/Sec24 trunk domain 274 500 IPR006896 GO:0006886|GO:0006888|GO:0030127
Gma19g02103 1385 SMART ProRS_C_1_2 1312 1385 IPR016061 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Gma19g02103 1385 Gene3D - 1306 1385 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Gma19g02103 1385 MobiDBLite consensus disorder prediction 1 19 - -
Gma19g02103 1385 Pfam Anticodon binding domain 1189 1285 IPR004154 -
Gma19g02103 1385 Gene3D Severin 738 833 IPR029006 -
Gma19g02103 1385 MobiDBLite consensus disorder prediction 20 42 - -
Gma19g02103 1385 SUPERFAMILY Class II aaRS and biotin synthetases 910 1176 IPR045864 -
Gma19g02103 1385 SUPERFAMILY Helical domain of Sec23/24 622 722 IPR036175 GO:0006886|GO:0006888|GO:0030127
Gma19g02103 1385 MobiDBLite consensus disorder prediction 75 89 - -
Gma19g02103 1385 CDD ProRS_core_arch_euk 911 1172 IPR033721 -
Gma19g02103 1385 SUPERFAMILY Class II aaRS ABD-related 1177 1304 - -
Gma19g02103 1385 Gene3D Bira Bifunctional Protein; Domain 2 905 1182 IPR045864 -
Gma19g02103 1385 MobiDBLite consensus disorder prediction 1 113 - -
Gma19g02103 1385 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 967 1182 IPR006195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02103 Gma-Chr19 49877628 49888979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02103 - - gmx:100781518 1660.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02103 19 49877628 49888979 Gma03g02068 03 46209313 46222001 GST