Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02056 ATGGCAACTATGACTGGTGTGAGCCTTTCATGCCCCAGGGTTTTCTTCAACGCATCAGCCTCACCGCAAAACGCGCATGCTGTAAAGTTCTCACTTCCACCCAGCCAAGCAGTGCGACCGGGTAGTATCAAGTTGGGTCGCGTGATGAGGATCCGACCCGTTCGCGCTGCGCCTGAGCGCATATCGGAGAAGGTGGAGGAGAGCATAAAGAACGCGCAGGAGGCGTGCGCCGGCGATCCGACGAGCGGCGAGTGCGTGGCGGCGTGGGACGAGGTGGAGGAGCTGAGCGCGGCGGCGAGCCACGCCAGGGACAAGCAAAAGGAAAAGGACTCCGACCCGCTCGAGAATTACTGCAAGGACAACCCGGAGACCATTGAGTGCAAAACTTTCGAAGACTGA 399 0.594 MATMTGVSLSCPRVFFNASASPQNAHAVKFSLPPSQAVRPGSIKLGRVMRIRPVRAAPERISEKVEESIKNAQEACAGDPTSGECVAAWDEVEELSAAASHARDKQKEKDSDPLENYCKDNPETIECKTFED 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02056 132 Pfam CP12 domain 61 131 - -
Gma19g02056 132 PANTHER CALVIN CYCLE PROTEIN CP12-1 1 132 - -
Gma19g02056 132 SMART CP12_2 61 132 IPR003823 -
Gma19g02056 132 MobiDBLite consensus disorder prediction 97 120 - -
Gma19g02056 132 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 132 IPR039314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02056 Gma-Chr19 49489232 49489630 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02056 - - gmx:100812168 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02056 19 49489232 49489630 Gma03g02021 03 45807660 45808627 GST
Gma19g02056 19 49489232 49489630 Gma10g00643 10 7091343 7100921 PCT
Gma19g02056 19 49489232 49489630 Gma02g00119 02 1157327 1157828 PCT
Gma10g00643 10 7091343 7100921 Gma19g02056 19 49489232 49489630 PCT
Gma02g00119 02 1157327 1157828 Gma19g02056 19 49489232 49489630 PCT