Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00643 ATGGATCGTACGCTTGTTATGTCTTCACCTAATGTCTGTTCAAACACTAATGGTGGAAATCTCATGCGCAGGAAACATTCCACCATGGCCAACAATATATACTATCCAACTTCTTGCGTATCAAAAGCTTCACAATGCCATAGGAAAACTCAAATAGAATGCAATCTTTTGAGGTCACAACAGTCAATTTTGAATCATCATTACAAATGCATTGAAGGAAGGCCTACATTTCAAGAATGCAATAGAAAATATGTTGTAAAAGCAGCCCATGCTATACCATCTTTTGATTCTGAATCTCACGCTTCCAGTCCCAAAAACATTTTGGACCCTGTCAAAAAATTCTTGGTTGCTTTGTACTGGTTTTGCAATCCTCACTCGATGATTGGCCGAACATTAAGCGCAACATCTGGGTGTCTGCTTGCAGTGGAGAAATTGTCAGATATATCTCCATTATTTTTCATTGGTTTGTTACAGGTCTTGGTACCCAACTTCTTTATGGATATTTATGTTAATGGTGTGAATCAACTGTTTGACCTTGAAATAGACAAGATAAATAAACCATTTTTACCATTAGTATCTGGGAACTTATCCATTACAAATGCTGTCTTTATTGTAGCATCATCTGCAATTCTGAGTTTTTGGCTAAGCTTGATTATAGGTTCTTGGTCATTGATTTGGAACGTTGCGCTGTGCTTTTTGCTGTGGACTGCCTATTCAGTAAATGTGCCCCTGTTGAGATGGAAGAGATCACCAGTACTCACAGCAATGATTATGTTTTCTAGTTGGACACTTATATTTCCAATTACATATTTCCTTCACATGCAGACGTTTGTGTTCAAAAGGCCAGTTGTCTTTACAAGATCGTTGATTGTTTCTATGGTATTCTATGGTTTCTACTCTATAAGTTTAGCATTGTCCAAGGATATACCCGACATCGAAGGAGATACAAAATTTGGCATACGTTCTTTTGCAACACGTTTAGGTAAAAAAAAGGTATTTTGGATTTGTGTTTCCCTATTCGAAGTGGCTTTTGGAGTTGTCCTCCTCGCAGGAGCATCATCTTCTTCTCCCCTCTGGATTAAAATTATTACGGGTCTAGGAAGTATTATTCCTGCTACAATTCTCTGGTACCAGACCAAATATGTAGATTTGTCAAGTCCAGATTCGACCAGATCCTTCTATATGCTGAACTGGAAGTTGTTGAACGTAGCATTCTTGTTCCTGCCTTTAATTAGATAA 1239 0.3785 MDRTLVMSSPNVCSNTNGGNLMRRKHSTMANNIYYPTSCVSKASQCHRKTQIECNLLRSQQSILNHHYKCIEGRPTFQECNRKYVVKAAHAIPSFDSESHASSPKNILDPVKKFLVALYWFCNPHSMIGRTLSATSGCLLAVEKLSDISPLFFIGLLQVLVPNFFMDIYVNGVNQLFDLEIDKINKPFLPLVSGNLSITNAVFIVASSAILSFWLSLIIGSWSLIWNVALCFLLWTAYSVNVPLLRWKRSPVLTAMIMFSSWTLIFPITYFLHMQTFVFKRPVVFTRSLIVSMVFYGFYSISLALSKDIPDIEGDTKFGIRSFATRLGKKKVFWICVSLFEVAFGVVLLAGASSSSPLWIKIITGLGSIIPATILWYQTKYVDLSSPDSTRSFYMLNWKLLNVAFLFLPLIR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00643 412 Gene3D UbiA prenyltransferase 289 411 - -
Gma10g00643 412 PANTHER HOMOGENTISATE SOLANESYLTRANSFERASE, CHLOROPLASTIC 7 412 - -
Gma10g00643 412 Gene3D UbiA prenyltransferase 124 277 IPR044878 -
Gma10g00643 412 Pfam UbiA prenyltransferase family 134 398 IPR000537 GO:0016021|GO:0016765
Gma10g00643 412 PANTHER HOMOGENTISATE PHYTYLTRANSFERASE 1, CHLOROPLASTIC 7 412 - -
Gma10g00643 412 CDD PT_UbiA_HPT1 118 409 IPR044502 GO:0004659
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00643 Gma-Chr10 7091343 7100921 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00643 K09833 - gmx:100778084 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00643 10 7091343 7100921 Gma02g00119 02 1157327 1157828 GST
Gma19g02056 19 49489232 49489630 Gma10g00643 10 7091343 7100921 PCT
Gma03g02021 03 45807660 45808627 Gma10g00643 10 7091343 7100921 PCT
Gma10g00643 10 7091343 7100921 Gma19g02056 19 49489232 49489630 PCT
Gma10g00643 10 7091343 7100921 Gma03g02021 03 45807660 45808627 PCT