Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02048 ATGTCTTCCAGCTTCTCACCCCTTGCCATCTTCCTCCTCCTCCTTCTGGTCCGGTACACGTGCGAGGCACGTGAGCCGTTCGCGTGCGACCCAAAAAATGGCGGCACGAAGAAGATGGCGTTTTGCAAGGTTTCGCTGGCGATAGCGGAGAGGGTGAAGGATCTGATTGGAAGGTTGACGCTGGAAGAGAAGGTAAGGCTTCTAGTGAACAATGCCGCGGCAGTTCCGAGGCTTGGGATGAAAGGGTACGAGTGGTGGTCTGAGGCACTCCATGGTGTTTCAAATATGGGTCCCGCCGTTAAGTTTAACGCACAGTTTCCTGCCGCTACTAGCTTCCCTCAAGTCATCACCACCGCTGCTTCCTTCAATGCTTCTCTCTGGGAGGCAATCGGACAGGTAGTGTCGGATGAGGCCAGGGCCATGTACAACGGTGGAACAGCAGGGCTCACGTATTGGAGCCCAAACGTTAACATTTTCAGGGACCCTAGGTGGGGCCGTGGACAGGAAACTCCCGGTGAGGACCCTGTGTTGGCCGGTACTTATGCTGCTACTTATGTCAGGGGGCTACAGGGAACCCACGCTAACCGGTTGAAGGTTGCTGCTTGTTGCAAACATTTCACTGCTTATGATCTTGATAATTGGAACGGCATGGATCGATTCCACTTTAATGCACAGGTGAGTAAGCAGGACATAGAGGATACATTCGACGTGCCATTCAAGATGTGTGTGAGCGAAGGCAAAGTCGCCAGTGTCATGTGTTCTTATAATCAAGTCAATGGGGTCCCTACCTGTGCTGACCCCAACCTCCTCAAGAAAACTGTTCGTGGCCTGTGGCAACTTGACGGGTACATTGTATCAGACTGTGATTCTGTTGGGGTGTTTTATGATAACCAACATTACACACCAACGCCAGAAGAAGCTGCTGCCGATGCCATTAAAGCAGGTTTGGATTTAGACTGTGGGCCTTTCTTAGCTGTGCACACGCAGAATGCGGTCAGAAAAGGCTTGCTAAGCGAAGCTGATGTCAATGGTGCTTTGGTGAATACACTGACGGTCCAAATGAGGTTAGGGATGTTTGATGGAGAGCCCTCGGCCCATCCATATGGTCACTTGGGCCCAAAAGATGTGTGCAAACCGGCCCACCAAGAACTGGCTCTTGAAGCTGCCAGACAAGGAATTGTACTTCTTAAGAACACTGGTCCTGTTTTGCCACTCTCCTCACAGCTTCATCGCACCGTGGCTGTCATCGGGCCCAATTCTAAAGCTACTATTACAATGATTGGAAATTATGCTGGTGTTGCTTGTGGATACACCAACCCCTTACAAGGGATAGGAAGATATGCACGGACTGTTCATCAGTTGGGTTGTCAAAATGTAGCCTGTAAAAATGACAAGCTGTTTGGACCTGCTATAAATGCGGCCCGTCAAGCAGATGCAACGGTTTTGGTTATGGGCTTGGACCAGTCCATTGAAGCTGAAACGGTGGACAGGACAGGCTTGCTTTTGCCTGGTCGTCAACAAGACCTTGTTTCAAAGGTGGCAGCTGCCTCAAAGGGACCAACTATTTTGGTCTTAATGTCTGGTGGTCCTGTGGATATAACTTTTGCAAAGAATAACCCTCGAATTGTGGGTATTCTGTGGGCTGGTTATCCGGGCCAAGCTGGTGGTGCTGCCATTGCAGATATCTTGTTTGGAACAGCTAACCCAGGGGGAAAGCTGCCAGTAACATGGTACCCAGAAGAGTACCTAACAAAGTTACCAATGACAAACATGGCAATGCGAGCGACCAAATCAGCAGGGTATCCAGGAAGAACGTATCGGTTCTACAATGGTCCAGTGGTGTATCCATTTGGACACGGGTTGACATACACACACTTTGTTCATACACTAGCAAGTGCTCCCACAGTGGTGTCAGTTCCCTTGAATGGTCATCGCCGTGCCAATGTCACCAATATTTCAAACAGGGCAATTAGAGTGACACATGCGCGGTGTGACAAGCTCTCCATCACCCTCCAGGTAGACATTAAAAATGTAGGGTCCAGAGATGGCACGCACACGTTGTTAGTTTTCTCTGCTCCCCCTGCAGGTTTTGGTCATTGGGCACTAGAGAAGCAACTAGTGGCCTTTGAGAAGGTCCATGTTCCTGCCAAGGGTCAACATAGAGTTGGAGTTAATATTCATGTGTGCAAGCTCCTAAGTGTAGTGGATAGGTCTGGGATTAGGAGAATCCCGTTGGGGGAACACAGTTTTAACATTGGTGATGTTAAACACTCCGTGTCACTTCAAGCTGCAGCACTTGGGATTATCAAGTCCTGA 2316 0.4961 MSSSFSPLAIFLLLLLVRYTCEAREPFACDPKNGGTKKMAFCKVSLAIAERVKDLIGRLTLEEKVRLLVNNAAAVPRLGMKGYEWWSEALHGVSNMGPAVKFNAQFPAATSFPQVITTAASFNASLWEAIGQVVSDEARAMYNGGTAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLAGTYAATYVRGLQGTHANRLKVAACCKHFTAYDLDNWNGMDRFHFNAQVSKQDIEDTFDVPFKMCVSEGKVASVMCSYNQVNGVPTCADPNLLKKTVRGLWQLDGYIVSDCDSVGVFYDNQHYTPTPEEAAADAIKAGLDLDCGPFLAVHTQNAVRKGLLSEADVNGALVNTLTVQMRLGMFDGEPSAHPYGHLGPKDVCKPAHQELALEAARQGIVLLKNTGPVLPLSSQLHRTVAVIGPNSKATITMIGNYAGVACGYTNPLQGIGRYARTVHQLGCQNVACKNDKLFGPAINAARQADATVLVMGLDQSIEAETVDRTGLLLPGRQQDLVSKVAAASKGPTILVLMSGGPVDITFAKNNPRIVGILWAGYPGQAGGAAIADILFGTANPGGKLPVTWYPEEYLTKLPMTNMAMRATKSAGYPGRTYRFYNGPVVYPFGHGLTYTHFVHTLASAPTVVSVPLNGHRRANVTNISNRAIRVTHARCDKLSITLQVDIKNVGSRDGTHTLLVFSAPPAGFGHWALEKQLVAFEKVHVPAKGQHRVGVNIHVCKLLSVVDRSGIRRIPLGEHSFNIGDVKHSVSLQAAALGIIKS 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02048 771 PRINTS Glycosyl hydrolase family 3 signature 112 131 IPR001764 GO:0004553|GO:0005975
Gma19g02048 771 PRINTS Glycosyl hydrolase family 3 signature 199 215 IPR001764 GO:0004553|GO:0005975
Gma19g02048 771 PRINTS Glycosyl hydrolase family 3 signature 273 291 IPR001764 GO:0004553|GO:0005975
Gma19g02048 771 SUPERFAMILY (Trans)glycosidases 39 392 IPR017853 -
Gma19g02048 771 PANTHER ALPHA-L-ARABINOFURANOSIDASE/BETA-D-XYLOSIDASE 4 766 - -
Gma19g02048 771 Pfam Glycosyl hydrolase family 3 C-terminal domain 393 623 IPR002772 GO:0004553|GO:0005975
Gma19g02048 771 Gene3D - 379 624 IPR036881 GO:0004553|GO:0005975
Gma19g02048 771 Pfam Fibronectin type III-like domain 691 754 IPR026891 -
Gma19g02048 771 Gene3D - 51 366 IPR036962 GO:0004553|GO:0005975
Gma19g02048 771 PANTHER SUGAR HYDROLASE-RELATED 4 766 IPR044993 GO:0009044|GO:0045493
Gma19g02048 771 Pfam Glycosyl hydrolase family 3 N terminal domain 106 347 IPR001764 GO:0004553|GO:0005975
Gma19g02048 771 Gene3D Immunoglobulins 647 767 IPR013783 -
Gma19g02048 771 SMART Fn3_like_2 685 756 IPR026891 -
Gma19g02048 771 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 393 626 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02048 Gma-Chr19 49405755 49412144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02048 4 771 Glycoside Hydrolase AT1G02640 71.745 0.0 1166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02048 - - gmx:100809501 1553.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02048 19 49405755 49412144 Gma19g02048 19 49405755 49412144 ECH
Gma19g02048 19 49405755 49412144 Gma03g02013 03 45744143 45752191 GST
Gma19g02048 19 49405755 49412144 Gma10g00132 10 1256894 1262904 PCT
Gma19g02048 19 49405755 49412144 Gma02g00128 02 1233002 1237472 PCT
Gma10g00132 10 1256894 1262904 Gma19g02048 19 49405755 49412144 PCT
Gma02g00128 02 1233002 1237472 Gma19g02048 19 49405755 49412144 PCT