Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02013 ATGTCTTCAACCTTCTCACCCCTCCTCAATCTCATTGCAGTCTTCCTCCTCCTCTTCTTGGTCCGGCACACGTGCGAGGCACGTGACCCGTTCGCGTGCGACCCGAAAAATGGCGCCACGGAGAACATGCCGTTTTGCAAGGCTTCACTGGCGATACCAGAGAGGGTGAAGGATCTGGTTGGAAGGTTGACGCTGCAAGAGAAGGTTAGGCTTCTGGTGAACAATGCCGCGGCGGTTCCAAGGCTTGGGATGAAAGGGTACGAGTGGTGGTCGGAGGCACTCCACGGAGTTTCAAATGTGGGTCCCGGAGTTAAGTTTAATGCACAGTTTCCCGGTGCTACTAGCTTCCCTCAAGTCATCACCACCGCTGCTTCCTTCAATGCTTCTCTCTGGGAGGCCATCGGACAGGTAGTGTCGGATGAGGCAAGGGCCATGTACAACGGTGGAACAGCAGGGCTCACGTATTGGAGCCCAAACGTGAACATTTTCAGGGACCCAAGGTGGGGCCGTGGACAGGAAACTCCCGGTGAGGACCCAGTGTTAGCCGGTACATATGCTGCTAGTTACGTCAGGGGACTACAGGGAACGGACGGTAACCGGTTGAAGGTTGCTGCTTGTTGCAAACACTTCACGGCTTATGACCTCGATAATTGGAATGGCATGGATCGATTCCACTTTAATGCACAAGTGAGTAAGCAGGACATAGAGGAAACATTCGACGTGCCATTCAGGATGTGTGTGAGCGAAGGGAAAGTAGCCAGTGTCATGTGTTCTTACAATCAAGTCAATGGGGTCCCTACCTGTGCCGACCCCAACCTCCTCAAGAAAACAGTTCGTGGCCTGTGGCAACTTGATGGGTACATAGTATCAGACTGTGATTCTGTTGGGGTGTTTTATGATAACCAACATTACACACCAACGCCAGAAGAAGCTGCTGCTGATGCCATTAAAGCAGGTTTGGATTTAGACTGTGGGCCTTTCCTAGCTGTGCACACGCAGAATGCGGTCGAAAAAGGGTTGCTTAGCGAAGCTGATGTGAACGGTGCTTTGGTGAATACACTGACGGTCCAAATGAGGTTAGGCATGTTTGATGGAGAGCCATCGGCCCATGCATATGGCAAATTGGGCCCAAAAGATGTGTGCAAACCGGCCCATCAAGAACTCGCCCTTGAAGCTGCCAGACAAGGAATTGTGCTTCTTAAGAACACTGGTCCTGTTTTGCCACTCTCCCCACAGCGTCACCATACCGTGGCTGTCATTGGACCCAATTCTAAAGCCACCGTTACAATGATTGGAAATTATGCTGGTGTTGCATGTGGATACACCAATCCCTTACAAGGGATAGGAAGATATGCCAAGACTATTCATCAGTTGGGTTGTGAAAATGTAGCTTGTAAAAATGACAAGTTGTTTGGGTCTGCTATAAACGCGGCCCGTCAAGCAGATGCAACGGTTTTGGTGATGGGCCTGGACCAGTCCATTGAAGCTGAAACGGTGGACAGGACTGGCTTGCTTTTGCCTGGTCGTCAACAAGACCTTGTTTCAAAAGTGGCAGCTGCCTCAAAGGGACCAACTATTTTGGTCATAATGTCTGGTGGTTCTGTGGATATAACTTTTGCAAAGAATAACCCTCGAATTGTGGGCATCCTGTGGGCTGGTTATCCAGGCCAAGCTGGTGGTGCTGCCATTGCAGATATCCTGTTTGGAACAACTAACCCAGGGGGCAAGCTGCCGGTGACATGGTACCCACAAGAATACCTAACAAAGTTGCCAATGACAAACATGGCAATGCGAGGAAGCAAATCAGCAGGGTACCCAGGAAGAACGTATCGGTTCTACAATGGTCCAGTGGTGTATCCATTTGGACACGGCTTGACATACACACACTTTGTTCATACATTAGCGAGTGCTCCCACAGTGGTGTCAGTTCCCTTGAATGGTCACCGCCGTGCCAATGTCACCAATATTTCAAACAGGGCAATTAGAGTGACACATGCACGGTGTGACAAACTCTCCATCAGCCTCGAAGTAGACATTAAAAATGTGGGGTCCAGAGATGGCACGCACACGTTGCTAGTTTTCTCTGCTCCTCCTGCAGGTTTTGGCCATTGGGCACTAGAGAAGCAACTTGTGGCCTTTGAGAAAATCCATGTTCCTGCGAAGGGTCTACAGAGAGTTGGAGTCAATATTCACGTGTGCAAGCTTTTAAGTGTGGTGGATAAGTCTGGGATTAGGAGAATCCCGTTGGGGGAACACAGTTTTAACATTGGCGATGTTAAACACTCCGTGTCACTTCAGGCTGCAGCACTTGGGATTATCAAGTCCTGA 2328 0.4996 MSSTFSPLLNLIAVFLLLFLVRHTCEARDPFACDPKNGATENMPFCKASLAIPERVKDLVGRLTLQEKVRLLVNNAAAVPRLGMKGYEWWSEALHGVSNVGPGVKFNAQFPGATSFPQVITTAASFNASLWEAIGQVVSDEARAMYNGGTAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLAGTYAASYVRGLQGTDGNRLKVAACCKHFTAYDLDNWNGMDRFHFNAQVSKQDIEETFDVPFRMCVSEGKVASVMCSYNQVNGVPTCADPNLLKKTVRGLWQLDGYIVSDCDSVGVFYDNQHYTPTPEEAAADAIKAGLDLDCGPFLAVHTQNAVEKGLLSEADVNGALVNTLTVQMRLGMFDGEPSAHAYGKLGPKDVCKPAHQELALEAARQGIVLLKNTGPVLPLSPQRHHTVAVIGPNSKATVTMIGNYAGVACGYTNPLQGIGRYAKTIHQLGCENVACKNDKLFGSAINAARQADATVLVMGLDQSIEAETVDRTGLLLPGRQQDLVSKVAAASKGPTILVIMSGGSVDITFAKNNPRIVGILWAGYPGQAGGAAIADILFGTTNPGGKLPVTWYPQEYLTKLPMTNMAMRGSKSAGYPGRTYRFYNGPVVYPFGHGLTYTHFVHTLASAPTVVSVPLNGHRRANVTNISNRAIRVTHARCDKLSISLEVDIKNVGSRDGTHTLLVFSAPPAGFGHWALEKQLVAFEKIHVPAKGLQRVGVNIHVCKLLSVVDKSGIRRIPLGEHSFNIGDVKHSVSLQAAALGIIKS 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02013 775 PRINTS Glycosyl hydrolase family 3 signature 116 135 IPR001764 GO:0004553|GO:0005975
Gma03g02013 775 PRINTS Glycosyl hydrolase family 3 signature 203 219 IPR001764 GO:0004553|GO:0005975
Gma03g02013 775 PRINTS Glycosyl hydrolase family 3 signature 277 295 IPR001764 GO:0004553|GO:0005975
Gma03g02013 775 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 397 630 IPR036881 GO:0004553|GO:0005975
Gma03g02013 775 Pfam Glycosyl hydrolase family 3 N terminal domain 110 352 IPR001764 GO:0004553|GO:0005975
Gma03g02013 775 SUPERFAMILY (Trans)glycosidases 43 396 IPR017853 -
Gma03g02013 775 Gene3D Immunoglobulins 651 771 IPR013783 -
Gma03g02013 775 Gene3D - 383 628 IPR036881 GO:0004553|GO:0005975
Gma03g02013 775 Gene3D - 55 372 IPR036962 GO:0004553|GO:0005975
Gma03g02013 775 Pfam Glycosyl hydrolase family 3 C-terminal domain 397 627 IPR002772 GO:0004553|GO:0005975
Gma03g02013 775 SMART Fn3_like_2 689 760 IPR026891 -
Gma03g02013 775 PANTHER ALPHA-L-ARABINOFURANOSIDASE/BETA-D-XYLOSIDASE 8 770 - -
Gma03g02013 775 PANTHER SUGAR HYDROLASE-RELATED 8 770 IPR044993 GO:0009044|GO:0045493
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02013 Gma-Chr3 45744143 45752191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02013 16 775 Glycoside Hydrolase AT1G02640 71.822 0.0 1156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02013 - - gmx:100789316 1567.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02013 03 45744143 45752191 Gma03g02013 03 45744143 45752191 ECH
Gma19g02048 19 49405755 49412144 Gma03g02013 03 45744143 45752191 GST
Gma03g02013 03 45744143 45752191 Gma10g00132 10 1256894 1262904 PCT
Gma03g02013 03 45744143 45752191 Gma02g00128 02 1233002 1237472 PCT
Gma10g00132 10 1256894 1262904 Gma03g02013 03 45744143 45752191 PCT
Gma02g00128 02 1233002 1237472 Gma03g02013 03 45744143 45752191 PCT