Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02044 ATGGCGCATCGAGGAGCCACGCTGTTCTTCCTTCTATTCGCTATCTGCTATTCTCTCATCGCCATTGCTGGAAAGAGCTATTACGATATACTTCAACTGTCGAAGGGTGCATCGGACGAGCAGATAAAGAGGGCGTATAGGAAGCTAGCATTGAAGTACCATCCTGATAAGAACCCCGGCAATGAAGAAGCTAATAAGAAATTTGCTGAGATTAGCAATGCGTATGAAGTGTTGTCGGATAGCGAGAAGAGGAATATTTACGATAGGTATGGTGAGGAAGGTTTGAAGCAGCATGCTGCTAGTGGAGGCAGAGGTGGTGGAATGAACTTCCAAGATATTTTTGGCTCTTTCTTTGGTGGGGGACAAATGGAAGAAGAAGAGAAAATTGTAAAAGGAGATGACGTGGTTGTTGATTTGGATGCAACACTTGAAGATTTGTACATGGGAGGTACCTTGAAGGTTTGGAGGGAAAAGAATGTACTAAAGCCAGCATCTGGGAAAAGACGCTGTAACTGTAGAAATGAGGTTTATCACAAGCAAATTGGGCCTGGGATGTTTCAACAGATGACAGAGCAGGTCTGTGAGCAATGTCCCAACGTCAAATATGTAAGGGAGGGGTATTTCATCACTGTTGATATTGAGAAAGGCATGCAAGATGGGCAGGAGGTGCTATTTTATGAGGACGGTGAACCCATAATTGATGGAGAATCTGGAGATTTAAGGGTTAGTAACTTGTCACTTTCAATATCCATGTTATTATGTATGCATTGTGCTGACTATTATATGGCTGAACAGTTTCGTATCCGTACTGCACCTCATGACGTCTTCAGAAGAGAAGGCAATGACTTGCACACTACTGTCACTATAACTCTGGTTCAAGCCCTTGTTGGTTTTGAGAAGACCATTAAACACCTAGATGAGCATCTGGTGGACATAAGCACAAAGGAAATCACAAAGCCAAAGCAGGTGAGGAAGTTCAAAGGGGAGGGTATGCCATTGCATATGAGCAACAAAAAAGGAGATCTTTACGTCACTTTTGAGGTTCTATTCCCCACGTCACTAACGGAGGAGCAGAAAACAAAGATAAAAGCAATTCTTGGTTAG 1104 0.4303 MAHRGATLFFLLFAICYSLIAIAGKSYYDILQLSKGASDEQIKRAYRKLALKYHPDKNPGNEEANKKFAEISNAYEVLSDSEKRNIYDRYGEEGLKQHAASGGRGGGMNFQDIFGSFFGGGQMEEEEKIVKGDDVVVDLDATLEDLYMGGTLKVWREKNVLKPASGKRRCNCRNEVYHKQIGPGMFQQMTEQVCEQCPNVKYVREGYFITVDIEKGMQDGQEVLFYEDGEPIIDGESGDLRVSNLSLSISMLLCMHCADYYMAEQFRIRTAPHDVFRREGNDLHTTVTITLVQALVGFEKTIKHLDEHLVDISTKEITKPKQVRKFKGEGMPLHMSNKKGDLYVTFEVLFPTSLTEEQKTKIKAILG 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02044 367 SUPERFAMILY HSP40/DnaJ peptide-binding domain 275 360 IPR008971 GO:0006457|GO:0051082
Gma19g02044 367 SUPERFAMILY HSP40/DnaJ peptide-binding domain 131 242 IPR008971 GO:0006457|GO:0051082
Gma19g02044 367 Pfam DnaJ C terminal domain 266 351 IPR002939 -
Gma19g02044 367 CDD DnaJ 27 80 IPR001623 -
Gma19g02044 367 Gene3D - 127 243 - -
Gma19g02044 367 SUPERFAMILY Chaperone J-domain 24 121 IPR036869 -
Gma19g02044 367 Pfam DnaJ domain 27 88 IPR001623 -
Gma19g02044 367 SMART dnaj_3 25 83 IPR001623 -
Gma19g02044 367 PRINTS DnaJ domain signature 46 61 IPR001623 -
Gma19g02044 367 PRINTS DnaJ domain signature 28 46 IPR001623 -
Gma19g02044 367 PRINTS DnaJ domain signature 63 83 IPR001623 -
Gma19g02044 367 PRINTS DnaJ domain signature 83 102 IPR001623 -
Gma19g02044 367 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 265 366 IPR044713 GO:0006457|GO:0030544
Gma19g02044 367 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 8 242 IPR044713 GO:0006457|GO:0030544
Gma19g02044 367 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Gma19g02044 367 Gene3D - 273 351 - -
Gma19g02044 367 PANTHER BNAA09G39960D PROTEIN 265 366 - -
Gma19g02044 367 PANTHER BNAA09G39960D PROTEIN 8 242 - -
Gma19g02044 367 CDD DnaJ_C 133 354 - -
Gma19g02044 367 Pfam DnaJ C terminal domain 136 242 IPR002939 -
Gma19g02044 367 Gene3D DnaJ domain 23 126 IPR036869 -
Gma19g02044 367 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02044 Gma-Chr19 49360949 49364830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02044 42 88 Miscellaneous Gene Families AT5G49580 57.447 2.64e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02044 K09517 - gmx:100807885 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02044 19 49360949 49364830 Gma19g02044 19 49360949 49364830 ECH
Gma19g02044 19 49360949 49364830 Gma03g02010 03 45700124 45704615 GST