Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02010 ATGGCGCCTCGTGGAGCCACGCTGTTGTTCCTTCTATGCGCTCTCTGCTATTCTCTCATCGCCATTGCTGGAAAGAGCTATTACGATATACTTCAACTTTCTAAGGGTGCGTCGGACGAACAGATAAAGAGAGCGTATAGGAAGCTAGCATTGAAGTACCATCCTGATAAGAACCCGGGCAATGAAGAGGCTAATAAGAAATTTGCGGAGATTAGCAATGCGTATGAAGTGTTGTCTGATAGCGAGAAGAGGAATATTTACGATAGGTATGGTGAAGAGGGTTTGAAGCAGCATGCTGCTAGTGGAGGCAGAGGTGGTGGAATGAACTTCCAAGATATTTTTAGCACTTTCTTTGGTGGGGGACCAATGGAGGAAGAAGAGAAAATTGTAAAAGGAGATGACTTGGTTGTTGATTTGGATGCAACACTTGAAGATTTGTACATGGGAGGTACCTTGAAGGTTTGGAGGGAAAAGAATGTACTAAAGCCTGCTCCTGGGAAAAGACGCTGTAACTGTAGAAATGAGGTTTATCACAAGCAAATTGGGCCTGGGATGTTTCAACAGATGACAGAGCAGGTCTGTGAGCAATGTCCTAACGTCAAATACGTAAGGGAGGGGTATTTCATCACTGTTGATATTGAGAAAGGCATGCAAGATGGGCAGGAGGTGCTATTCTATGAGGATGGAGAGCCCATAATTGATGGGGAATCTGGAGATTTAAGGTTTCGTATCCGAACTGCACCTCATGACGTCTTCAGAAGAGAAGGCAATGACTTGCACTCTACTGTCACTATAACTCTTGTTCAAGCCCTTGTTGGTTTTGAGAAGACCATTAAACACCTAGATGAGCATCTGGTGGACATAAGCACAAAGGAAATCACAAAGCCAAAGCAGGTGAGGAAGTTCAAAGGGGAGGGTATGCCATTGCATATGAGCAACAAAAAAGGAGATCTTTACGTCACTTTTGAGGTTCTATTTCCCACGTCTCTAAGGGAGGAGCAGAAAACAAAGATAAAAGCAATTCTTGGTTAG 1032 0.439 MAPRGATLLFLLCALCYSLIAIAGKSYYDILQLSKGASDEQIKRAYRKLALKYHPDKNPGNEEANKKFAEISNAYEVLSDSEKRNIYDRYGEEGLKQHAASGGRGGGMNFQDIFSTFFGGGPMEEEEKIVKGDDLVVDLDATLEDLYMGGTLKVWREKNVLKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCEQCPNVKYVREGYFITVDIEKGMQDGQEVLFYEDGEPIIDGESGDLRFRIRTAPHDVFRREGNDLHSTVTITLVQALVGFEKTIKHLDEHLVDISTKEITKPKQVRKFKGEGMPLHMSNKKGDLYVTFEVLFPTSLREEQKTKIKAILG 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02010 343 CDD DnaJ_C 133 330 - -
Gma03g02010 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 251 336 IPR008971 GO:0006457|GO:0051082
Gma03g02010 343 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 8 342 IPR044713 GO:0006457|GO:0030544
Gma03g02010 343 Pfam DnaJ domain 27 88 IPR001623 -
Gma03g02010 343 Gene3D - 249 327 - -
Gma03g02010 343 CDD DnaJ 27 80 IPR001623 -
Gma03g02010 343 SUPERFAMILY Chaperone J-domain 24 121 IPR036869 -
Gma03g02010 343 SMART dnaj_3 25 83 IPR001623 -
Gma03g02010 343 Pfam DnaJ C terminal domain 136 327 IPR002939 -
Gma03g02010 343 PANTHER BNAA09G39960D PROTEIN 8 342 - -
Gma03g02010 343 Gene3D DnaJ domain 23 127 IPR036869 -
Gma03g02010 343 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Gma03g02010 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 130 253 IPR008971 GO:0006457|GO:0051082
Gma03g02010 343 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Gma03g02010 343 PRINTS DnaJ domain signature 28 46 IPR001623 -
Gma03g02010 343 PRINTS DnaJ domain signature 46 61 IPR001623 -
Gma03g02010 343 PRINTS DnaJ domain signature 63 83 IPR001623 -
Gma03g02010 343 PRINTS DnaJ domain signature 83 102 IPR001623 -
Gma03g02010 343 Gene3D - 128 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02010 Gma-Chr3 45700124 45704615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02010 42 88 Miscellaneous Gene Families AT5G49580 57.447 2.47e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02010 K09517 - gmx:100799701 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02010 03 45700124 45704615 Gma03g02010 03 45700124 45704615 ECH
Gma19g02044 19 49360949 49364830 Gma03g02010 03 45700124 45704615 GST