Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02042 ATGTCCTCGATCATGGAAACACAACCTGAATGCGCTGTCATCAACATCCCAAACATAAAAACAGAGCAACATGTGTCCGTGTCCCCAAAGAAGAAGAACGGTGGCGGCATGCGCTTTCTCAGGGTGGCACTCTTCAAGATGCGAGGGCGTTCCGCAAAACCAACCGCGCTTCAGGTGGATAATAATGAGGATGGTGAGAGGTCCAAGAGCACTTGGGGGAAGTTTGTGGGGTCCATGAGGCCATTGCACCTTCAAAGCACCCAATCTCCACGCTCATCACCTGATTCTCCATCTGAATATAAATCGGATTGCGGCGGCTATGTTTCTGATTTTGGGGCGGAGGAGGAGCCTTATTCGCCTTCCCCACCTAGTAGCCGTTACGCTTCAGCCGTAGGGTTGAACGAACTCGTTCAAAATGACGAGGAAAATGAGAAGCAAGAGGTGATTGTGGAGGACTACGAGCAACACGTTGATGGAGACGGGGATGAGATGATTGATGCCAAGGCTGAGGATTTCATTGCTCAGTTCTACCAAGAAATGAAGCTGCAACGTTTGGATTCCGTGGATCGTCGTTACGTTGAGCGAAGCCAAAGGTCATTGGGTTTGTGA 609 0.5008 MSSIMETQPECAVINIPNIKTEQHVSVSPKKKNGGGMRFLRVALFKMRGRSAKPTALQVDNNEDGERSKSTWGKFVGSMRPLHLQSTQSPRSSPDSPSEYKSDCGGYVSDFGAEEEPYSPSPPSSRYASAVGLNELVQNDEENEKQEVIVEDYEQHVDGDGDEMIDAKAEDFIAQFYQEMKLQRLDSVDRRYVERSQRSLGL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02042 202 MobiDBLite consensus disorder prediction 81 99 - -
Gma19g02042 202 Pfam Cotton fibre expressed protein 162 197 IPR008480 -
Gma19g02042 202 MobiDBLite consensus disorder prediction 51 127 - -
Gma19g02042 202 PANTHER COTTON FIBER PROTEIN 5 197 - -
Gma19g02042 202 PANTHER COTTON FIBER PROTEIN 5 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02042 Gma-Chr19 49336702 49337310 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02042 - - gmx:102662079 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02042 19 49336702 49337310 Gma03g02008 03 45688312 45689705 GST
Gma19g02042 19 49336702 49337310 Gma10g00145 10 1361001 1361597 PCT
Gma19g02042 19 49336702 49337310 Gma02g00139 02 1337643 1338278 PCT
Gma10g00145 10 1361001 1361597 Gma19g02042 19 49336702 49337310 PCT
Gma02g00139 02 1337643 1338278 Gma19g02042 19 49336702 49337310 PCT