Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00139 ATGGAGGCAAAGGCTGAAAACTCTATGATCGTTAGCATTGACCAAAAAGCAATTATTACCCCTCACGAAGAACCTAATAATAACATCACTCGTTCTTCCCTCAAGAAGGGTAAGAGGCAGAAGAACTTCTTCAAGGTGGCGCTGTTCATGATGCGAGGGCGTTCTCGTAAATCCAAAATGCTCGCCGTGGATGACGAGTCCAAGAGCATATGGAGGAAGCTGGTGGGGTCCATGAGGCCATTGCACCTACAAAGCAACCAATCTCCATCGCATGATATTGATAATAATAATAATAATAATAACATTCCTCCTCATCAATCTAAAATGATGAAGATTACCTCGGCACCGTCTGAAAACGGCGACGATGGGTTTGATTCTGCATCGGAGTTCACATACTCGCCGTCTCCGGCTAGTAGTCGTTACGCCTCAGCCGTGGGGCTAAACGAAATGGTGCAGGAGGAGGAGGAAGAGGTTGCGAAGGAGAAGATTAATAATGATGATGGGGATGGGGATGAGATGATTGATGCCAAGGCTGAGGAGTTCATTGCTCAATTTTACCATCAAATGAGGTTGCAGAGTTTGGATGTCACGGATGATCATTACCAAGAGATAAGCATGAGGTCATTAGGCTTATGA 636 0.4528 MEAKAENSMIVSIDQKAIITPHEEPNNNITRSSLKKGKRQKNFFKVALFMMRGRSRKSKMLAVDDESKSIWRKLVGSMRPLHLQSNQSPSHDIDNNNNNNNIPPHQSKMMKITSAPSENGDDGFDSASEFTYSPSPASSRYASAVGLNEMVQEEEEEVAKEKINNDDGDGDEMIDAKAEEFIAQFYHQMRLQSLDVTDDHYQEISMRSLGL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00139 211 Pfam Cotton fibre expressed protein 171 203 IPR008480 -
Gma02g00139 211 MobiDBLite consensus disorder prediction 82 108 - -
Gma02g00139 211 Coils Coil 144 164 - -
Gma02g00139 211 PANTHER COTTON FIBER PROTEIN 1 206 - -
Gma02g00139 211 PANTHER COTTON FIBER PROTEIN 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00139 Gma-Chr2 1337643 1338278 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00139 - - gmx:100800206 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00145 10 1361001 1361597 Gma02g00139 02 1337643 1338278 GST
Gma19g02042 19 49336702 49337310 Gma02g00139 02 1337643 1338278 PCT
Gma03g02008 03 45688312 45689705 Gma02g00139 02 1337643 1338278 PCT
Gma02g00139 02 1337643 1338278 Gma19g02042 19 49336702 49337310 PCT
Gma02g00139 02 1337643 1338278 Gma03g02008 03 45688312 45689705 PCT