Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01999 ATGGAATTGATGTGTCATTGTTCGAGCTTTCTTCTTCCGCCGGAGAATCCTAACACGACGTGTTCGCTTTCTCTAAAGTACGCTCTCGTTGTTCTCAACCAAAGCCTCCCGAGATTTGCTCCCCTGCTTTGGGACCACGCTCAAGTGCGAGTTTGTGCTGATGGAGGTGCCAATAGGGTGTATGATGAAATGCCTCTTTTCTTCCCTCATCAACAACCTTCCCATGTTCGCACCAGGTACAAGCCTGATGTAATTAAAGGGGACATGGATTCAATCAGGACAGAAGTACTTGACTTCTATGCAAAGCTGGGAACTAAGATAATTGATGAGTCTCATGATCAGGACACCACAGATTTACACAAATGTGTGGCATACATACGTGACCTCACCCCAAATATTGATGGAGCAGAACTATGCATTCTTGTTGCTGGAGCACTTGGTGGGAGATTTGACCATGAGATTGGAAATATTAACGTGCTGTGCCGATTTTCCAACACACGAATTATCCTTCTATCTGATGATTGCCTCATTCACCTTCTTCCAAAGAATCATTGTCATAAAATCTTTGTTCAATCTTCTGTTGAGGGTCCGCATTGTGGTGTCATTCCCATTGGGATGCCGTCTGGAAGCTCTACAACCACAGGACTCAAATGGGACCTCAATGATGCAGCGATGAGTTTTGGAGGTTTAATAAGCACATCAAATATTGTAAAAGGGGAAATAGTTACAGTACAGTCTGATTCAGATCTTCTTTGGACTATTTCTATTAAGAAGCTCTAG 780 0.4333 MELMCHCSSFLLPPENPNTTCSLSLKYALVVLNQSLPRFAPLLWDHAQVRVCADGGANRVYDEMPLFFPHQQPSHVRTRYKPDVIKGDMDSIRTEVLDFYAKLGTKIIDESHDQDTTDLHKCVAYIRDLTPNIDGAELCILVAGALGGRFDHEIGNINVLCRFSNTRIILLSDDCLIHLLPKNHCHKIFVQSSVEGPHCGVIPIGMPSGSSTTTGLKWDLNDAAMSFGGLISTSNIVKGEIVTVQSDSDLLWTISIKKL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01999 259 PIRSF TPK1 2 259 IPR016966 GO:0004788|GO:0005524|GO:0009229
Gma19g01999 259 PANTHER THIAMIN PYROPHOSPHOKINASE 3 257 - -
Gma19g01999 259 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 26 176 IPR036759 GO:0004788|GO:0005524|GO:0009229
Gma19g01999 259 Gene3D - 168 258 - -
Gma19g01999 259 Pfam Thiamin pyrophosphokinase, catalytic domain 42 168 IPR007371 GO:0004788|GO:0005524|GO:0009229
Gma19g01999 259 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 186 251 IPR007373 GO:0009229|GO:0030975
Gma19g01999 259 PANTHER THIAMINE PYROPHOSPHOKINASE 1 3 257 - -
Gma19g01999 259 SMART TPK_B1_binding_a_2_a 186 250 IPR007373 GO:0009229|GO:0030975
Gma19g01999 259 Gene3D Thiamin pyrophosphokinase, catalytic domain 27 167 IPR036759 GO:0004788|GO:0005524|GO:0009229
Gma19g01999 259 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 178 258 IPR036371 GO:0009229
Gma19g01999 259 CDD TPK 28 254 IPR007371 GO:0004788|GO:0005524|GO:0009229
Gma19g01999 259 TIGRFAM thi_PPkinase: thiamine pyrophosphokinase 29 254 IPR006282 GO:0004788|GO:0006772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01999 Gma-Chr19 48989712 48993126 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01999 K00949 - gmx:100795320 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01999 19 48989712 48993126 Gma19g01999 19 48989712 48993126 ECH
Gma19g01999 19 48989712 48993126 Gma03g01963 03 45378522 45381963 GST