Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01963 ATGGAATTGATGTGCCATTGTTCGAGCTTTCTTCTTCCGCCGGAGAATCCTAACACGACGTGTTCGCTTTCTCTAAAGTACGCTCTCGTTGTTCTCAACCAAAGCCTACCGAGATTTGCTCCTCTGCTCTGGGACCACGCTCAAGTACGAGTTTGCGCTGATGGAGGTGCCAATAGGGTGTATGATGAAATGCCTCTTTTCTTCCCTCATCAACAACCTTCCCATGTTCGCACCAGGTACAAGCCTGATGTAATTAAAGGAGACATGGATTCAATCAGGACAGAAGTACTTGACTTCTATGCAAAGCTGGGAACTAAGATAATTGATGAGTCTCATGATCAGGACACCACAGATTTACACAAATGTGTGGCATACATACGTGACCTCACCCCAAATGTTGATGGATCAGAACTATGCATTCTTGTTGCTGGAGCACTTGGTGGGAGATTCGACCATGAGATTGGAAATATTAATGTGCTGTGCCGATTTTCCAACACACGAATTATCCTTCTATCTGATGATTGCCTCATTCATCTTCTTCCAAAGAATCATTGTCATCAAATCTTTATTGAATCTTCTGTTGAGGGTCCGCATTGTGGACTCATTCCCATTGGGATGCCTTCTGGAAGCTCTACATCCACAGGACTCAAATGGGATCTCAATGACACAGCGATGAGTTTTGGAGGTTTAGTAAGTACATCCAATATTGTAAAAGGGGAAATAGTTACAGTACAGTCTGATTCAGATCTTCTTTGGACTATTTCTATTAAGAAGCTCGAGGTTTTACATGGTGCATAG 798 0.4298 MELMCHCSSFLLPPENPNTTCSLSLKYALVVLNQSLPRFAPLLWDHAQVRVCADGGANRVYDEMPLFFPHQQPSHVRTRYKPDVIKGDMDSIRTEVLDFYAKLGTKIIDESHDQDTTDLHKCVAYIRDLTPNVDGSELCILVAGALGGRFDHEIGNINVLCRFSNTRIILLSDDCLIHLLPKNHCHQIFIESSVEGPHCGLIPIGMPSGSSTSTGLKWDLNDTAMSFGGLVSTSNIVKGEIVTVQSDSDLLWTISIKKLEVLHGA 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01963 265 Gene3D Thiamin pyrophosphokinase, catalytic domain 27 167 IPR036759 GO:0004788|GO:0005524|GO:0009229
Gma03g01963 265 PANTHER THIAMINE PYROPHOSPHOKINASE 1 3 257 - -
Gma03g01963 265 Pfam Thiamin pyrophosphokinase, catalytic domain 42 168 IPR007371 GO:0004788|GO:0005524|GO:0009229
Gma03g01963 265 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 178 259 IPR036371 GO:0009229
Gma03g01963 265 SMART TPK_B1_binding_a_2_a 186 250 IPR007373 GO:0009229|GO:0030975
Gma03g01963 265 PIRSF TPK1 2 264 IPR016966 GO:0004788|GO:0005524|GO:0009229
Gma03g01963 265 TIGRFAM thi_PPkinase: thiamine pyrophosphokinase 29 254 IPR006282 GO:0004788|GO:0006772
Gma03g01963 265 PANTHER THIAMIN PYROPHOSPHOKINASE 3 257 - -
Gma03g01963 265 Gene3D - 168 258 - -
Gma03g01963 265 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 186 251 IPR007373 GO:0009229|GO:0030975
Gma03g01963 265 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 26 176 IPR036759 GO:0004788|GO:0005524|GO:0009229
Gma03g01963 265 CDD TPK 28 254 IPR007371 GO:0004788|GO:0005524|GO:0009229
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01963 Gma-Chr3 45378522 45381963 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01963 K00949 - gmx:100786303 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01963 03 45378522 45381963 Gma03g01963 03 45378522 45381963 ECH
Gma19g01999 19 48989712 48993126 Gma03g01963 03 45378522 45381963 GST