Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01998 atgttagaaaagtgtttgggagctcaaagggcgcgaagattccaccgagctctcaggcattgcaaggtcacgatcctctgcctcgtcctcaccatcgttgtcctgcgcggcaccatcggcgccggaaaattcggcacgccggagcaggacttggttgacattcgcaaccgcttctacacccgcAAGCTCCCCGAACCCCATCGCCTCCTCGCCGAGCTCCATTCCACAACGACGCCGTTTGAAAGTTCCACTTCCACCACCAATTACAACGCCTTCGACATCAACACCATCTTGGTCGACGAAACAGAAGACGAGAACCGCGAGAAAGTTAACCCACACGAGGCGTATCGTCTCGGCCCCAAAATATCGATCTGGGACGAACAGAGATCTCGCTGGCTTCGCGAGaatcccaatttctcgaatttccttcgacccaacaagccccgcgtgcttctcgtaactgggtcgtcgccgaaaccgtgcgaaaatcccgttggggatcattacttgttaaaggctattaagaacaaaattgattattgtcgtttgcatgggattgaggtgttctacaacatggctctcctcgacgctgaaatggcagggttttgggcgaagcttcctctgataaggaagcttcttttgtcgcaccctgaggtggagtttctatggtggatggatagtgatgccatgttcactgacatgaagTTTGCGGTGCCGTGGGAGAGGTACAAAGACTCCAACTTGGTGATGCATGGGTGGAATGAGATGGTTTACGATGACAAGAATTGGATTGGGTTGAACACTGGGAGTTTTTTGTTGAGGAATTGTCAGTGGTCGTTGGATATTCTTGATGCTTGGGCTCCAATGGGGCCCAAAGGGAAGGTTAGAGATGAAGCTGGGAAAGTACTCACGCGTGAGCTTAAGGATAGGCCTGTTTTTGAAGCTGATGATCAATCTGCGATGGTTTATTTGCTGGCTAAGGAGAGGGAGAAGTGGGGTGGGAAGGTTTATCTTGAGAATGGTTATTACTTGCATGGCTATTGGGGGATTTTGGTTGATAGGTATGAGGAGATGATTGAGAATTATCACCCTGGTTTTGGTGACCATAGGTGGCCATTGGTGACTCATTTTGTGGGGTGCAAGCCTTGTGGGAAGTTTGGGGATTACCCCGTTGAGAGATGCTTGAAGCAGATGGATAGGGCTTTCAATTTTGGGGATAATCAAATACTGCATATTTATGGGTTCACGCACAAGTCGTTGGGTAGTAGGGGAGTTAAGAGAATACGGAATGAGACTAGCAATCCTCTGGAGGTCAAAGATGAACTTGGATTGCTTCATCCAGCGTTTAAAGCAGTTGAGATTATTCCTATCCGTGAATTTCCACATGCAGCAGATTGGTTCATTCAGACAAAAAGGAGCTTAAGATTTAGAATAGAGAGAAAAGCAACCCATGCCAAACAAGGCTTAATGAAATCAGCAGCGATGGGATTGACAGGGCGAAAGAAGCGCATGCAGCCAAACAGGGTCAGAAACAAGCCAAGCCGTGTTGCCCCAGAGCACCGTGAAGTAAAGCAACAGAGCCGTGGGGTTTCTGTGGAAACCTCCATCTGCCCACACCATCCAAGCAGAGAGACCCATCAAGAAGCTTGA 1650 0.3394 MLEKCLGAQRARRFHRALRHCKVTILCLVLTIVVLRGTIGAGKFGTPEQDLVDIRNRFYTRKLPEPHRLLAELHSTTTPFESSTSTTNYNAFDINTILVDETEDENREKVNPHEAYRLGPKISIWDEQRSRWLRENPNFSNFLRPNKPRVLLVTGSSPKPCENPVGDHYLLKAIKNKIDYCRLHGIEVFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMKFAVPWERYKDSNLVMHGWNEMVYDDKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDEAGKVLTRELKDRPVFEADDQSAMVYLLAKEREKWGGKVYLENGYYLHGYWGILVDRYEEMIENYHPGFGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILHIYGFTHKSLGSRGVKRIRNETSNPLEVKDELGLLHPAFKAVEIIPIREFPHAADWFIQTKRSLRFRIERKATHAKQGLMKSAAMGLTGRKKRMQPNRVRNKPSRVAPEHREVKQQSRGVSVETSICPHHPSRETHQEA 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01998 549 MobiDBLite consensus disorder prediction 513 527 - -
Gma19g01998 549 Pfam galactosyl transferase GMA12/MNN10 family 147 386 IPR008630 GO:0016021|GO:0016757
Gma19g01998 549 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 146 298 IPR029044 -
Gma19g01998 549 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 4 454 IPR008630 GO:0016021|GO:0016757
Gma19g01998 549 MobiDBLite consensus disorder prediction 496 549 - -
Gma19g01998 549 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE-RELATED 4 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01998 Gma-Chr19 48982715 48986259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01998 1 454 Glycosyltransferase AT3G62720 78.728 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01998 K08238 - gmx:100794266 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01998 19 48982715 48986259 Gma19g01998 19 48982715 48986259 ECH
Gma19g01998 19 48982715 48986259 Gma03g01962 03 45372152 45373470 GST