Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01962 ATGTTAGAAAAGTGTTTGGGAGTTCAAAGGGCGCGAAGATTCCACAGAGCTCTCAGGCATTgcaaggtaacgatcctctgcctcgtcctcaccatcattgtcctgcgcggcaccatcggcgccggaaaattcggcacgccagagcaggacttcgtcgacattcgcaaccgcttctactccctcaagctccccgaaccccatcgcctcctcgCCGAGCTTCATTCCACCACGACGCCGTTTCAAAGTTCCACTTCCACCAACAATTACAACGCCTTCGACATCAACACCATATTGGTCGACGAAAAAGAAGACGAGAACCTTGAGAATTTCAACCCGCACCAGCCGTATCGTCTCGGCCCCAAAATCTCGAACTGGAACGAACAAAGATCTCGCtggcttcgcgagaatcccaatttctcgaatttccttcgacccaacaagccccgcgtgcttctcTGGTCGTTGGATATTCTTGATGCTTGGGCTCCAATGGGGCCCAAAGGGAAAGTTAGAGATGAAGCTGGGAAAGTGCTCACGCGTGAGCTTAAGGATAGGCCTGTTTTTGAAGCTGATGATCAATCTGCAATGGTTTATTTGCTGGCTAAGGAGAGGGACAAGTGGGAGGGTAAGGTTTATCTTGAGAATGGTTATTACTTGCATGGCTATTGGGGGATTCTGGTTGATAGATATGAGGAGATGATTGAAAATTATCACCCTGGTTTTGGTGACCATAGGTGGCCATTGGTGACTCATTTTGTGGGGTGCAAGCCTTGTGGGAAGTTTGGGGATTATCCGGTGGAGAGGTGCTTGAAGCAGATGGATAGGGCTTTCAATTTTGGGGATAATCAGATACTGCAGATTTATGGCTTTACACACGAGTCGTTGGGTAGTAGGGGGAGAGTTAAGAGAATACGGAATGAGACTAGCAATCCTCTTGAGGTCTAA 945 0.3608 MLEKCLGVQRARRFHRALRHCKVTILCLVLTIIVLRGTIGAGKFGTPEQDFVDIRNRFYSLKLPEPHRLLAELHSTTTPFQSSTSTNNYNAFDINTILVDEKEDENLENFNPHQPYRLGPKISNWNEQRSRWLRENPNFSNFLRPNKPRVLLWSLDILDAWAPMGPKGKVRDEAGKVLTRELKDRPVFEADDQSAMVYLLAKERDKWEGKVYLENGYYLHGYWGILVDRYEEMIENYHPGFGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQIYGFTHESLGSRGRVKRIRNETSNPLEV 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01962 314 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 4 152 IPR008630 GO:0016021|GO:0016757
Gma03g01962 314 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 153 314 IPR008630 GO:0016021|GO:0016757
Gma03g01962 314 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE-RELATED 4 152 - -
Gma03g01962 314 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE-RELATED 153 314 - -
Gma03g01962 314 Pfam galactosyl transferase GMA12/MNN10 family 153 261 IPR008630 GO:0016021|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01962 Gma-Chr3 45372152 45373470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01962 122 314 Glycosyltransferase AT4G02500 78.061 1.11e-105 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01962 K08238 - gmx:100794266 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01962 03 45372152 45373470 Gma03g01962 03 45372152 45373470 ECH
Gma19g01998 19 48982715 48986259 Gma03g01962 03 45372152 45373470 GST