Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01996 ATGGAAATCGGAGGCAGAAAACTGAAAAGCGGAGAAACGATGGCCGCTGAATCGGTGACGCAGTCGGCACCTCCGACGAGATCAAGAGGAAGAATCACTTTACTCGAAAACCCGAAAATACCCTTCGCACTTGCTCTTCTCTTTGCCGACGCCGTCCTCGTCTCTCTCATAATCGCATTCGTCCCCTATACAAAGATAGATTGGGACGCTTACATGTCACAGATTACCGGGTTTCTCGGTGGAGAACGAGATTACCGCAACCTCAAAGGCGACACTGGTCCTCTCGTCTACCCTGCTGGCTTTCTTTACATTTACTCTGCATTCAAGTATCTTACCGGTGGACAAGTTTACCCTGCTCAGATTCTCTTCGGAGTGTTGTATATCGTTAACTTAGCTATCGTTCTCGCCATCTATGTCAAAACCGATGTGGTTCCGTGGTGGGCACTTTGCTTGCTTTCTCTGTCGAAAAGGGTGCATTCTATCTTCGTGCTTCGTTTATTTAATGATTGTGTGGCCATGACACTTCTTCATGCTGCGTTGCTCTTGTTCGTGCACCGAAGGTGGAATCTGGGGTTGATTTTGTTTAGTGGAGCTGTTTCGGTGAAGATGAATGTTCTTCTTTATGCTCCTCCTTTGTTACTCCTCATGCTGAAGGCTATGGATATCAGCGGCGTGTTATTGGCATTATCTGGCGCAGCACTGGTTCAGATATTATTGGGGCTTCCTTTCCTGGTTTCATATCCAGTTGCATACATATCAAGAGCCTTCAATCTTGGCCGTGTCTTCATCCATTTCTGGTCCGTTAACTTCAAATTCATCCCTGAACCAGTATTTGTGTCCAGGGGATTTGCAATCCTTTTGTTGGCTGCTCACCTCATATTACTTGCTTCATTCGCACATTATAGTTGGTGCAAACATGAAGGAGGGCTTTGCAACTTCCTACATTCCAGATATGTCTTTATGAGAATGAAGTTTGCACTTTTCTTATCTTCCTCTTTTTCTAAGAAGGTTGGCAAGAGCAGTTCATCATCCCTCAGGATCCTTAATAAAGAACATATTGTGACAACTATGTTTGTTGGGAACTTCATTGGCATTGTATGTGCTCGGTCGTTGCATTATCAGTTCTATTCATGGTACTTCTATAGCTTACCCTACTTGTTGTGGAGAACGAATTACCCAACATTGCTGCGTTTGATTTTGTTCGTGGGAGTGGAGCTGTGCTGGAATATCTATCCTTCGAACAGCCTTTCTTCAGTGCTACTTCTTTGCCTTCACTTAATTATTCTCTTGGGTTTGTGGTCTTCTCCACCTGAGTATCCTTATGAAGAAAATAAACCATCCTCTTGCAAAAACAAATAG 1359 0.4408 MEIGGRKLKSGETMAAESVTQSAPPTRSRGRITLLENPKIPFALALLFADAVLVSLIIAFVPYTKIDWDAYMSQITGFLGGERDYRNLKGDTGPLVYPAGFLYIYSAFKYLTGGQVYPAQILFGVLYIVNLAIVLAIYVKTDVVPWWALCLLSLSKRVHSIFVLRLFNDCVAMTLLHAALLLFVHRRWNLGLILFSGAVSVKMNVLLYAPPLLLLMLKAMDISGVLLALSGAALVQILLGLPFLVSYPVAYISRAFNLGRVFIHFWSVNFKFIPEPVFVSRGFAILLLAAHLILLASFAHYSWCKHEGGLCNFLHSRYVFMRMKFALFLSSSFSKKVGKSSSSSLRILNKEHIVTTMFVGNFIGIVCARSLHYQFYSWYFYSLPYLLWRTNYPTLLRLILFVGVELCWNIYPSNSLSSVLLLCLHLIILLGLWSSPPEYPYEENKPSSCKNK 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01996 452 MobiDBLite consensus disorder prediction 1 27 - -
Gma19g01996 452 Pfam ALG3 protein 45 418 IPR007873 GO:0000030
Gma19g01996 452 PANTHER DOL-P-MAN:MAN(5)GLCNAC(2)-PP-DOL ALPHA-1,3-MANNOSYLTRANSFERASE 29 449 - -
Gma19g01996 452 PANTHER NOT56 - RELATED 29 449 IPR007873 GO:0000030
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01996 Gma-Chr19 48977412 48981979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01996 14 452 Miscellaneous Gene Families AT2G47760 69.283 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01996 K03845 - gmx:100793743 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01996 19 48977412 48981979 Gma19g01996 19 48977412 48981979 ECH
Gma19g01996 19 48977412 48981979 Gma03g01960 03 45364103 45369044 GST