Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01960 ATGGAAACCGGAGGCAGAAAACTGAAAAGCAGAGAAACGATGGCCTTTGAATCGGTGACGCAGTCAGCACCTCCTCCGAGATCAAGAGGAAGAATCACCTTGCTCGAAAACCCCAAAACACCCTTCGCCCTTGCTCTTCTCTTTGCCGACGCCGTCCTCGTCTCTCTCATAATCGCCTTCGTCCCCTATACGAAGATAGATTGGGACGCTTACATGTCACAGGTTACCGGGTTTCTCGGTGGAGAACGAGATTACCGCAACCTCAAGGGTGACACTGGTCCTCTCGTCTACCCTGCTGGCTTTCTCTACATTTACTCTGCTTTCCAGTATCTTACCGAAGGACAAGTTTACCCTGCTCAGATTTTGTTCGGAGTGTTGTATATCGTTAACTTGGCAATCGTTCTCGCCGTCTATGTCAAAACTGATGTGGTTCCGTGGTGGGCACTTTGCTTGCTTTCTCTGTCGAAAAGAGTGCATTCTATCTTCGTGCTTCGTTTATTTAATGACTGTGTGGCCATGACACTTTTTCATGCTGCATTGCTCTTACTCGTGCACCGTAGGTGGAATCTTGGGTTGATTTTGTTTAGTGGAGCTGTTTCGGTGAAGATGAATGTGCTTCTTTATGCTCCTCCTTTGCTGCTTCTCATGCTGAAGGCTATGGACATCAGTGGCGTGTTATTGGCATTATCTGGTGCAGCACTGGTTCAGATATTACTGGGACTTCCTTTCCTGGTTTCATACCCAGTTACATACATATCAAGAGCCTTCAACCTTGGCCGTGTCTTCATCCATTTCTGGTCTGTTAACTTCAAATTCATCCCTGAACCAGTATTTGTGTCCAAGGGATTTGCAATCTTTTTGTTGGCTGCTCACCTCATATCACTTGCTTCATTTGCGCATTATAGCTGGTGCAAACATGAAGGAGGGCTTTGCAACTTCCTGCATTCCAGATATGTCTTTATGAGAATGAAGTTTGCACTTTTCTTCTCTTCCTCTTTTTCTAAGGTCGGCAAGAGCAGTTCATCATCCCTCAAGATCCTTAATAAAGAACATATTGTGACAACTATGTTTGTTGGGAACTTCATTGGCATTGTATGTGCTCGGTCGTTGCATTATCAGTTCTATTTGTGGTACTTCTATAGCTTGCCCTACTTGTTGTGGAGAACGAATTACCCTACATTGCTGCGTTTGATTTTGTTCGTGGGAGTGGAGCTGTGCTGGAATATCTATCCTTCGAACAGCCTTTCTTCAGCGTTACTTCTTTGTCTTCACACAATTATTCTCTGGGGTTTGTGGTCTGCTCCACCTGAGTATCCTTATGAAGAAAATAAACCATCCTCTCACAAAAACAAATAG 1356 0.4469 METGGRKLKSRETMAFESVTQSAPPPRSRGRITLLENPKTPFALALLFADAVLVSLIIAFVPYTKIDWDAYMSQVTGFLGGERDYRNLKGDTGPLVYPAGFLYIYSAFQYLTEGQVYPAQILFGVLYIVNLAIVLAVYVKTDVVPWWALCLLSLSKRVHSIFVLRLFNDCVAMTLFHAALLLLVHRRWNLGLILFSGAVSVKMNVLLYAPPLLLLMLKAMDISGVLLALSGAALVQILLGLPFLVSYPVTYISRAFNLGRVFIHFWSVNFKFIPEPVFVSKGFAIFLLAAHLISLASFAHYSWCKHEGGLCNFLHSRYVFMRMKFALFFSSSFSKVGKSSSSSLKILNKEHIVTTMFVGNFIGIVCARSLHYQFYLWYFYSLPYLLWRTNYPTLLRLILFVGVELCWNIYPSNSLSSALLLCLHTIILWGLWSAPPEYPYEENKPSSHKNK 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01960 451 Pfam ALG3 protein 45 417 IPR007873 GO:0000030
Gma03g01960 451 PANTHER DOL-P-MAN:MAN(5)GLCNAC(2)-PP-DOL ALPHA-1,3-MANNOSYLTRANSFERASE 30 450 - -
Gma03g01960 451 PANTHER NOT56 - RELATED 30 450 IPR007873 GO:0000030
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01960 Gma-Chr3 45364103 45369044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01960 14 451 Miscellaneous Gene Families AT2G47760 68.764 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01960 K03845 - gmx:100785253 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01960 03 45364103 45369044 Gma03g01960 03 45364103 45369044 ECH
Gma19g01996 19 48977412 48981979 Gma03g01960 03 45364103 45369044 GST