Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01979 ATGGCATCATCTCATTCCCACATACACATTAATCGACTCGCTTCCGAGCAGAGCCCCTACCTTCTCCAACACGCACATAACCCTGTTCATTGGTATCCCTGGGGTGAAGAAGCCTTCGCCGAAGCGCGCCGCCGAGACGCGCCTATCTTCTTGTCAAGTAATTCTCCTTTTTTTGCGTGTCATGTTATGGAGGTCGAGTCTTTCGAGGATGAAGCGGTTGCCAAGTTGCTGAACGATTGGTTTGTTAGCATTAAGGTGGATCGAGAGGAGCGACCAGATGTTGATAAGGTGTACATGTCGTATGTGCAGGCTTTGTATGGTGGAGGAGGTTGGCCCCTGAGTGTGTTTCTTTCACCTGACTTGAAACCTTTAATGGGTGGAACTTACTTCCCCCCTGATGACAAGTATGGACGACCTGGATTTAAGACTATACTTAGAAAGTTAAAAGAAGCTTGGGATAGTAAGAGGGATATGCTGATTAAGCGTGGATCATATGCAATTGAACAACTTTCTGAGGCAATGTCTGCTAGTTCAGATTCTGATAAACTGCCTGATGGGGTTCCAGCTGATGCGTTACGCCTATGCTCGGAGCAGCTTTCTGGGAGCTATGATTCAAAGTTTGGTGGTTTTGGATCTGCACCAAAGTTTCCCAGACCAGTTGAGATAAACTTGATGCTATATCACTCCAAAAAGTTGGAAGATACGGGGAAGTTGGATGGAGCTAATAGAATTCAGAAAATGGTTTTCTTTAGCTTGCAATGCATGGCAAAAGGCGGGATGCATGATCATATTGGAGGGGGATTTCACAGATACAGTGTGGATGAGTGCTGGCATGTTCCACATTTTGAGAAGATGCTTTATGATCAAGGGCAGCTTGCTAATGTTTATCTAGATGCGTTTTCTATCACAAAAGATACCTTTTATTCATATATATCACGGGATATCCTTGATTATTTAAGGAGAGATATGATTGGTCCAGAAGGTGAAATTTTTTCAGCAGAGGATGCTGACAGTGCAGAGACTGAAGGAGCTGCAAGAAAAAAGGAAGGAGCCTTTTACATATGGACAGGCAAAGAGGTTGCAGACATACTTGGAGAGCATGCTGCTCTTTTCGAGGAGCACTATTACATCAAGCAATCAGGTAACTGTAACCTATCTGGAATGAGTGATCCTCACGATGAATTCAAGGGAAAGAATGTCCTGATTGAGAGAAAGGAACCTTCAGAACTGGCATCAAAATATGGCATGTCAATTGAGACATATCAAGAAATTCTTGGAGAGTGCAGGCATAAGTTGTTTGAAGTAAGGTCAAGGCGTCCAAAGCCACATTTGGATGATAAGGTTATTGTATCATGGAATGGACTGGCAATCTCATCTTTTGCTAGGGCTTCTAAGATTCTCAAGGGTGAAGTTGAAGGGACCAAATTCTACTTTCCTGTCGTTGGCACTGAAGCAAAGGGGTACTTGAGAATTGCAGAAAAAGCAGCATTCTTTATTTGGAAACAGCTTTACAATGTGGAAACTCACAGGCTACACCATAGTTTCAGACATTCTCCGTCTAAAGCTCCTGCTTTCTTGGATGATTATGCTTTTCTGATTTCTGGATTGCTGGATCTCTATGAATTTGGTGGTGGAATTAACTGGCTTCTATGGGCCATTGAATTGCAGGAAACCCAGGATGCCTTGTTTCTTGATAGGACAGGAGGTGGATATTTCAATAATACAGGAGAAGATTCTTCCGTTCTCCTCCGGGTAAAGGAAGACCATGATGGTGCAGAACCCTCAGGAAACTCAGTTTCTGCTATAAATCTTATAAGATTGGCTTCCATGGTTGCTGGAAGTAAGGCTGAGCACTATAAGCAAAATGCAGAACATCTATTGGCCGTTTTTGAGAGAAGGTTGAAAGATATGGCTATGGCAGTGCCTCTAATGTGTTGTGCAGCAGACATGTTGCATGTACCTTCACGGAAGCAAGTGGTTGTGGTTGGTGAAAGGACTTCTGGGGACTTTGAAAACATGCTTGCTGCAGCTCATGCATTATATGATCCCAACAGAACAGTTATTCATATAGATCCCAACAACAAAGAAGAGATGGGATTTTGGGAAGTAAATAACAGCAATGTTGCTCTCATGGCAAAAAATAACTTTGCAGTTGACAAGGTTGTAGCTCTTGAGCGTGACGTGCACGGTTTCAATCATAGGGTGCACACTGGGTTCTTGCACCTTCAAATGCCGTCAAACCCACTTGCCCACAATTCTGAACTAATTGGCCTTGCCCTTTATTCTTCCGAGTGTTCTGGTTTGCATCCAACATGTGCCACCCCAAGTGGAGGAAGATAG 2340 0.4355 MASSHSHIHINRLASEQSPYLLQHAHNPVHWYPWGEEAFAEARRRDAPIFLSSNSPFFACHVMEVESFEDEAVAKLLNDWFVSIKVDREERPDVDKVYMSYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPDDKYGRPGFKTILRKLKEAWDSKRDMLIKRGSYAIEQLSEAMSASSDSDKLPDGVPADALRLCSEQLSGSYDSKFGGFGSAPKFPRPVEINLMLYHSKKLEDTGKLDGANRIQKMVFFSLQCMAKGGMHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYLDAFSITKDTFYSYISRDILDYLRRDMIGPEGEIFSAEDADSAETEGAARKKEGAFYIWTGKEVADILGEHAALFEEHYYIKQSGNCNLSGMSDPHDEFKGKNVLIERKEPSELASKYGMSIETYQEILGECRHKLFEVRSRRPKPHLDDKVIVSWNGLAISSFARASKILKGEVEGTKFYFPVVGTEAKGYLRIAEKAAFFIWKQLYNVETHRLHHSFRHSPSKAPAFLDDYAFLISGLLDLYEFGGGINWLLWAIELQETQDALFLDRTGGGYFNNTGEDSSVLLRVKEDHDGAEPSGNSVSAINLIRLASMVAGSKAEHYKQNAEHLLAVFERRLKDMAMAVPLMCCAADMLHVPSRKQVVVVGERTSGDFENMLAAAHALYDPNRTVIHIDPNNKEEMGFWEVNNSNVALMAKNNFAVDKVVALERDVHGFNHRVHTGFLHLQMPSNPLAHNSELIGLALYSSECSGLHPTCATPSGGR 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01979 779 PIRSF UCP006402_thioredoxin 1 729 IPR024705 -
Gma19g01979 779 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 3 724 IPR024705 -
Gma19g01979 779 SUPERFAMILY Thioredoxin-like 11 136 IPR036249 -
Gma19g01979 779 Gene3D - 477 657 IPR012341 GO:0005975
Gma19g01979 779 Gene3D Glutaredoxin 9 179 - -
Gma19g01979 779 Pfam Protein of unknown function, DUF255 11 170 IPR004879 -
Gma19g01979 779 SUPERFAMILY Six-hairpin glycosidases 198 592 IPR008928 GO:0005975
Gma19g01979 779 CDD SSP411 32 153 IPR004879 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01979 Gma-Chr19 48855228 48862644 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01979 - - gmx:100805578 1455.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01979 19 48855228 48862644 Gma19g01979 19 48855228 48862644 ECH
Gma19g01979 19 48855228 48862644 Gma03g01938 03 45221262 45227136 GST