Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01938 ATGCACTTGCTACTATCCAAGTCCCCACTATTACTGATACATAATTCTTCTATGCTCCTGCACCGCTTCTCTCCTCTTCTCCTTCCTCGTTTTCTCTTTCGCCAACCCCCCTTCCCCTCTTCGAATTTCAAACCTCTCACACTCAAGGTCCTCTCCATGGCATCGTCTCATTCCTCCCACCACATACACACTAATCGACTCGCTTCCGAACAGAGCCCCTATCTTCTCCAACACGCTCACAACCCTGTTGATTGGTATCCCTGGGGCGAAGAAGCCTTCGCCGAAGCGCGCCGGCGAGACGCGCCTATCTTCTTGTCAATTGGTTACAGCACTTGTCACTGGTGTCATGTTATGGAGGTCGAGTCTTTCGAGGATGAAGCGGTTGCCAAGTTGCTGAACGATTGGTTCGTTAGCATTAAGGTGGATCGAGAGGAGCGACCAGATGTTGATAAGGTGTACATGTCGTATGTGCAGGCTTTGTATGGTGGAGGAGGTTGGCCCCTGAGTGTGTTTCTTTCACCTGACTTGAAACCTTTAATGGGTGGAACTTACTTCCCCCCTGATGATAAGTATGGACGACCAGGATTTAAGACTATACTTAGAAAGGTAAAAGAAGCTTGGGATAGTAAGAGGGATATGCTAATTAAGAGTGGATCATATGCAATTGAACAGCTTTCTGAGGCAATGTCTGCTAGTTCAGATTCTGATAAACTGCCTGATGGGGTTCCAGCTGATGCGTTACGCCTATGCTCGGAGCAGCTCTCTGGGAGCTACGATTCAAAGTTTGGTGGGTTTGGATCTGCACCAAAGTTTCCCAGACCAGTTGAGATAAACTTGATGCTATATCACTCCAAAAAGTTGGAGGATACGGGGAAGTTGGGTGTAGCTAATGGAAGCCAGCAAATGGTTTTCTTTAGCTTGCAATGCATGGCAAAAGGTGGGATTCATGATCATATTGGAGGGGGATTTCACAGATACAGTGTGGATGAGTGCTGGCATGTTCCGCATTTTGAGAAGATGCTTTATGATCAAGGGCAGCTTGCCAATGTTTATCTGGATGCGTTTTCTATCACAAAAGATACCTTTTATTCTTATATATCACGAGATATCCTTGATTATTTAAGGAGAGATATGATTGGTCCAGAAGGTGAAATTTTTTCAGCAGAGGATGCTGACAGTGCAGAGACTGAAGGAGCTGCAAGAAAAAAGGAAGGAGCCTTTTACATATGGACAAGCAAAGAGGTTGAAGACTTACTTGGAGAGCATGCTGCTCTTTTTGAGGAGCACTATTACATCAAGCAATTGGGTAACTGTGACCTATCTGGAATGAGTGATCCTCACGATGAATTCAAGGGAAAGAATGTCCTGATTGAGAGAAAGGAACCTTCAGAACTGGCATCAAAATATGGCATGTCAGTTGAGACATATCAAGAAATTCTTGGAGAATGCAGGCATAAGTTGTTTGAAGTAAGGTCAAGGCGTCCAAAGCCACATTTGGATGATAAGGTTATTGTATCGTGGAATGGACTGGCAATCTCATCTTTTGCCAGGGCTTCTAAGATTCTCAAGGGTGAAGCTGAAGGGACCAAATTCTACTTTCCTGTCATTGGCACTGAACCAAAGGAGTACATGGGAATTGCAGAAAAAGCAGCATCCTTTATTAGGAAGCAACTTTACAATGTAGAAACTCACAGGCTACACCATAGTTTCAGACATTCGCCATCTAAAGCTCCTGCTTTCTTGGATGATTATGCTTTTCTGATTTCTGGATTGCTGGATCTCTATGAGTTTGGTGGTGGAATTAGCTGGCTTCTATGGGCCATTGAATTGCAGGAAACCCAGGATGCTTTGTTTCTTGATAAGACAGGAGGAGGATATTTCAATAATACAGGAGAAGATGCTTCCGTTCTCCTCCGTGTAAAGGAAGACCATGATGGGGCAGAACCCTCAGGAAACTCAGTTTCTGCTATAAATCTTATAAGATTGGCTTCCATGGTTGCTGGAAGTAAGGCTGAGCATTATAAGCGAAATGCAGAACATCTATTGGCAGTTTTTGAGAAAAGGTTGAAAGATATGGCTATGGCAGTGCCTCTAATGTGTTGTGCAGCAGATATGTTGCGTGTACTTTCTCGGAAGCAAGTGGTCGTGGTTGGTGAAAGGACGTCTGAGGACTTTGAAAACATGCTTGCTGCAGCTCATGCAGTATATGATCCCAACAGAACAGTTATTCATATAGATCCCAACAACAAAGACGAGATGGAATTTTGGGAAGTAAATAACAGTAATGTTGCTCTCATGGCAAAAAATAACTTTGCAGTCAACAAGGTTGTAGCTCTTGTATGCCAAAACTTCACTTGTAGCCCCTCTGTGACTGACCATTCGTCACTTAAAGCTTTGCTCTCCAAAAAACCTTCCTCTTCGTTCACGTAA 2430 0.4395 MHLLLSKSPLLLIHNSSMLLHRFSPLLLPRFLFRQPPFPSSNFKPLTLKVLSMASSHSSHHIHTNRLASEQSPYLLQHAHNPVDWYPWGEEAFAEARRRDAPIFLSIGYSTCHWCHVMEVESFEDEAVAKLLNDWFVSIKVDREERPDVDKVYMSYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPDDKYGRPGFKTILRKVKEAWDSKRDMLIKSGSYAIEQLSEAMSASSDSDKLPDGVPADALRLCSEQLSGSYDSKFGGFGSAPKFPRPVEINLMLYHSKKLEDTGKLGVANGSQQMVFFSLQCMAKGGIHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYLDAFSITKDTFYSYISRDILDYLRRDMIGPEGEIFSAEDADSAETEGAARKKEGAFYIWTSKEVEDLLGEHAALFEEHYYIKQLGNCDLSGMSDPHDEFKGKNVLIERKEPSELASKYGMSVETYQEILGECRHKLFEVRSRRPKPHLDDKVIVSWNGLAISSFARASKILKGEAEGTKFYFPVIGTEPKEYMGIAEKAASFIRKQLYNVETHRLHHSFRHSPSKAPAFLDDYAFLISGLLDLYEFGGGISWLLWAIELQETQDALFLDKTGGGYFNNTGEDASVLLRVKEDHDGAEPSGNSVSAINLIRLASMVAGSKAEHYKRNAEHLLAVFEKRLKDMAMAVPLMCCAADMLRVLSRKQVVVVGERTSEDFENMLAAAHAVYDPNRTVIHIDPNNKDEMEFWEVNNSNVALMAKNNFAVNKVVALVCQNFTCSPSVTDHSSLKALLSKKPSSSFT 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01938 809 PIRSF UCP006402_thioredoxin 48 807 IPR024705 -
Gma03g01938 809 SUPERFAMILY Thioredoxin-like 63 206 IPR036249 -
Gma03g01938 809 CDD SSP411 86 208 IPR004879 -
Gma03g01938 809 Gene3D - 535 709 IPR012341 GO:0005975
Gma03g01938 809 Pfam Protein of unknown function, DUF255 64 225 IPR004879 -
Gma03g01938 809 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 54 802 IPR024705 -
Gma03g01938 809 SUPERFAMILY Six-hairpin glycosidases 253 647 IPR008928 GO:0005975
Gma03g01938 809 Gene3D Glutaredoxin 62 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01938 Gma-Chr3 45221262 45227136 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01938 - - gmx:100777751 1581.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01938 03 45221262 45227136 Gma03g01938 03 45221262 45227136 ECH
Gma19g01979 19 48855228 48862644 Gma03g01938 03 45221262 45227136 GST