Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01971 ATGGCTGAAGGCGAGGGGTGTATTGAGCTTAAATTCCGCATATATGACGGAACTGATATAGCACACAGTACATATTCTTCATCTACCACAGTTGGTACCCTTAAGCAAAAGCTAGTTGCTGagtggcctcaagGCAAAACAGTTACACCAAAGTCTGTAAGTGACCTAAAGCTTATACATGCCGGTAAAGTTTTGGAAAACAATAAAACTCTTGCTGATTACAGAATAACGTTTGGTGAAATCCCTGGGGGTGTTGTTACGATGCATGTTGTAGTACAACCTCCAGTAACTAAAAAAAAAACAGAGAAGAATAAGGATGACAAGCAAAAGATGAATTCGTGCTCATGCACTATCCTTTAG 360 0.3806 MAEGEGCIELKFRIYDGTDIAHSTYSSSTTVGTLKQKLVAEWPQGKTVTPKSVSDLKLIHAGKVLENNKTLADYRITFGEIPGGVVTMHVVVQPPVTKKKTEKNKDDKQKMNSCSCTIL 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01971 119 ProSiteProfiles Ubiquitin domain profile. 8 76 IPR000626 GO:0005515
Gma19g01971 119 SMART ubq_7 8 93 IPR000626 GO:0005515
Gma19g01971 119 CDD Ubl_MUBs_plant 8 95 - -
Gma19g01971 119 Gene3D - 1 101 - -
Gma19g01971 119 Pfam Ubiquitin-2 like Rad60 SUMO-like 8 117 IPR039540 -
Gma19g01971 119 SUPERFAMILY Ubiquitin-like 4 98 IPR029071 -
Gma19g01971 119 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 119 - -
Gma19g01971 119 PIRSF MUB 1 119 IPR017000 -
Gma19g01971 119 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 119 IPR040015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01971 Gma-Chr19 48794686 48798419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01971 - - gmx:100818909 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01971 19 48794686 48798419 Gma19g01971 19 48794686 48798419 ECH
Gma19g01971 19 48794686 48798419 Gma03g01930 03 45171581 45172658 GST