Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01930 ATGGCTAAAGGCGAGGGACGTATTGAGCTTAAATTCCGCATATATGATGGAACTGATATAGCACATAGTACATATTCTTCATCTACCACAGTTGGTACCCTTAAGCAAAAGCTAGTTGCTGAGTGGCCTCAAGGCAAACCAGTTACACCAATGTCTGTAAGTGACCTAAAACTTATACATGCTGGTAAAGTTTTGGAAAACAACAAAACTCTTGCTGATTCCAGAATAACGTTTGGTGACATCCCTGGGGATGTTGTTACAATGCATGTTGTAGTACAACCTCGAGTAACTAAAAAGAAAACAGAGAAGAATAAGGAGAACAATCAAAAGATGAATTCATGCTCATGCACTATACTTTAG 360 0.3861 MAKGEGRIELKFRIYDGTDIAHSTYSSSTTVGTLKQKLVAEWPQGKPVTPMSVSDLKLIHAGKVLENNKTLADSRITFGDIPGDVVTMHVVVQPRVTKKKTEKNKENNQKMNSCSCTIL 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01930 119 Gene3D - 1 101 - -
Gma03g01930 119 ProSiteProfiles Ubiquitin domain profile. 8 76 IPR000626 GO:0005515
Gma03g01930 119 CDD Ubl_MUBs_plant 8 95 - -
Gma03g01930 119 Pfam Ubiquitin-2 like Rad60 SUMO-like 8 117 IPR039540 -
Gma03g01930 119 SUPERFAMILY Ubiquitin-like 5 98 IPR029071 -
Gma03g01930 119 MobiDBLite consensus disorder prediction 97 119 - -
Gma03g01930 119 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 119 - -
Gma03g01930 119 PIRSF MUB 1 119 IPR017000 -
Gma03g01930 119 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 119 IPR040015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01930 Gma-Chr3 45171581 45172658 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01930 - - gmx:100818909 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01930 03 45171581 45172658 Gma03g01930 03 45171581 45172658 ECH
Gma19g01971 19 48794686 48798419 Gma03g01930 03 45171581 45172658 GST