Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01947 ATGAAGAAAAATGGCGTTATTCCGTGGTGGATGAAGCAGCAATGGCGGGGAATAGTGAAAGTGCGTCTGAAATGGGTGAAGAACCGAAGCCTGGACCACGTGATCGACAAGGAAACCGATCTGAAGGCGGCGTGCCTCCTGAAGGACGCCGTGAACCGCTCCTCCACCGGCTTCCTCACCGCGCAATCCGTCGCCGACTGGCAGAAACTCCTCGGCCTCACCGTCCCCGTCCTCCGCTTTCTCCGCCGCTATCCCACTCTCTTCCAGGAGTTCCCCCACCCTCGCTGGGCCTCCCTCCCCTGCTTCCGCCTCACCGACACCGCACTCTTCCTCCACTCCCAGGAACTCTCCCTCCACCAAACCCaCCAAAACGACGCCGTCCAAACCCTCTCCAAGCTCCTCATGATGTCCAACTCACGCGCCCTCCCCCTCCACTCCCTCCACGCGCTCAAGTGGGATCTCGGTTTACCCGACACCTTCCACAAAACCCTAGTCCCCCTCTACCCCCACCAGTTCCAATTTGTCAGGTCCCCCAACGGCGTCGTTTCAATCCAGCTATCTCGCTGGCCCGAGGAACTCGCGGTTTCCGCGCTGCAGAAGAGCAACGAGGGTGGGACCCACTACCGCGAATTCAAGCGAGGACAATCGGCTTTGGCTTTTCCGATGCGGTTTCCGAGGGGTTACGGCGCGCAGAAGAAAGTGAGGACGTGGATGGAGGAGTTTCAGAAGCTTCCTTACGTTTCTCCTTACACGGATTCCACGAAGATTGATCCTAACAGCGATTTGATGGAGAAGCGCGTCGTTGGGGTTCTGCACGAGATTTTGAGTTTGACTCTGCACAAGAAAACCAAGAGGAACTACTTGAGGGGCTTGAGGGAAGAGTTTAACCTTCCGCATAAGTTTACCCGAATTTTCACCAGGTATCCCGGGATTTTTTACCTCTCCTTGAAGTGTAAAACCACCACGGTTACTCTCAAGGAAGGGTACCAGAGTGGGAAGCTAGTGGACCCGCACCCTCTTGCTCGGCATAGAGATAAGTTTTACCATGTGATGCAGACGGGGCTTCTATATCGCGGCGATGGATCGTTGAAACCTCAGGAGAACAATTTGCTGGCTGAGAATGATAAATTAAGGAGTGAAGACTCTGAGGTTGAAATGAGTGATGAACTCTGCGAGACTGAGTTAAGTGAATGA 1194 0.5461 MKKNGVIPWWMKQQWRGIVKVRLKWVKNRSLDHVIDKETDLKAACLLKDAVNRSSTGFLTAQSVADWQKLLGLTVPVLRFLRRYPTLFQEFPHPRWASLPCFRLTDTALFLHSQELSLHQTHQNDAVQTLSKLLMMSNSRALPLHSLHALKWDLGLPDTFHKTLVPLYPHQFQFVRSPNGVVSIQLSRWPEELAVSALQKSNEGGTHYREFKRGQSALAFPMRFPRGYGAQKKVRTWMEEFQKLPYVSPYTDSTKIDPNSDLMEKRVVGVLHEILSLTLHKKTKRNYLRGLREEFNLPHKFTRIFTRYPGIFYLSLKCKTTTVTLKEGYQSGKLVDPHPLARHRDKFYHVMQTGLLYRGDGSLKPQENNLLAENDKLRSEDSEVEMSDELCETELSE 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01947 397 MobiDBLite consensus disorder prediction 373 397 - -
Gma19g01947 397 Pfam Plant organelle RNA recognition domain 26 354 IPR021099 GO:0003723
Gma19g01947 397 PANTHER OS04G0546100 PROTEIN 11 396 - -
Gma19g01947 397 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 11 396 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01947 Gma-Chr19 48607313 48608950 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01947 - - gmx:100801315 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01947 19 48607313 48608950 Gma19g01947 19 48607313 48608950 ECH
Gma19g01947 19 48607313 48608950 Gma03g01907 03 44970082 44972739 GST
Gma19g01947 19 48607313 48608950 Gma10g00240 10 2217381 2219329 PCT
Gma10g00240 10 2217381 2219329 Gma19g01947 19 48607313 48608950 PCT