Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00240 ATGTTCTCCAGAAGCAAAAGCCACACCCTCTCCCACCTCAAGGCGAGATCCATATCAAGCCTGAAAGTAGTGTGGCGCAAGGACCCAGAACTCGACCGAGCCATAGAGTTGGACAAGCGATACAAGCAATGCGCCCGCGTCGTCAAAGAAGTCCTCAACGAACCAGGCCAGGTCATCCCTCTCCGCTACCTCGAAAAGCGCCGCGAAAGGATGCGCCTCAAGCTCAAAGCCGAAACCTTTCTCAACCAAAACCCCGGCCTCTTCGACGTCTACTACGACCGCATCAAACCCAAAACCGAACCGGTCCGCTTCCTCCGCCCCACCGACCGCCTCCGCCGATTCCTCCACCAGGAGCGACGCGTTTTCCTCGACAACGAGCCCTTCATCGTGTCCAAGTTGTGTAAACTGTTAATGATGTCGAAGAACAAGGTTGTCAGTGCTGACAAGCTACTTCACGTGAAGAGGGAGTTCGGCTTCCCCAACGATTTCTTGGTTGATTTGGTTCCTAGGTATCCGGAATATTTTAGGTTAACCGGTTCTCCTGGGGAGGGGAAATCGTTTCTGGAGTTGGTTAATTGGAACCCCGAGTTTGCAAAATCTGTAATTGAGGGAAGGGCTGAAGAGGAGAGTGAGCGTTTGGGGATTAGGGTTAGGCCCAGTTTCAATGTGCAGCTTCCACGAGGGTTTGTGTTGAAGAAGGAGATGAGGGAGTGGATTAGGGATTGGATGGAGCTTGATTACGTGTCCCCTTATGAGGATGTGTCTCATTTGGATCAGGCTTCTAGAGAGATGGAGAAGAGGTCCGTTGGAGTGTTCCATGAACTGCTCTCACTTTCCTTGCACAAGAGGATTCCTGTGCCGATTCTCGGAAAGTTTTGCGACGAGTATAGGTTTTCGAATGCGTTTTCCACCACTTTTACTAGGCATTCGGGGATATTCTATCTGTCTTTGAAAGGAGGGATTGAGACGGCGATGTTGAGAGAAGCGTACAGAGGCGATGAGTTGATTGACCGCGATCCTCTGCTCCGGATAAAGGATATGTTTGTTGAGTTGTTGGAGGATGGGTGGCGGCAAAGAGCAGAGCAGTTGAGGTTGAAGCAAGAGAAGGTTAAGGAAGATATGGAGTTATTGGCTACTAAAAATTACAGTGCTCCAAATAATGCTTCTGGTATCAGATCAAGCCGGCAGTACATTGTTGGAGGCCACAAAATGCGGAAAATGCTGAATTTCCGCAGGATGTTCCTCTGA 1248 0.5 MFSRSKSHTLSHLKARSISSLKVVWRKDPELDRAIELDKRYKQCARVVKEVLNEPGQVIPLRYLEKRRERMRLKLKAETFLNQNPGLFDVYYDRIKPKTEPVRFLRPTDRLRRFLHQERRVFLDNEPFIVSKLCKLLMMSKNKVVSADKLLHVKREFGFPNDFLVDLVPRYPEYFRLTGSPGEGKSFLELVNWNPEFAKSVIEGRAEEESERLGIRVRPSFNVQLPRGFVLKKEMREWIRDWMELDYVSPYEDVSHLDQASREMEKRSVGVFHELLSLSLHKRIPVPILGKFCDEYRFSNAFSTTFTRHSGIFYLSLKGGIETAMLREAYRGDELIDRDPLLRIKDMFVELLEDGWRQRAEQLRLKQEKVKEDMELLATKNYSAPNNASGIRSSRQYIVGGHKMRKMLNFRRMFL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00240 415 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 9 383 - -
Gma10g00240 415 Coils Coil 360 380 - -
Gma10g00240 415 Pfam Plant organelle RNA recognition domain 27 356 IPR021099 GO:0003723
Gma10g00240 415 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 9 383 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00240 Gma-Chr10 2217381 2219329 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00240 - - gmx:100778092 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00240 10 2217381 2219329 Gma10g00240 10 2217381 2219329 ECH
Gma19g01947 19 48607313 48608950 Gma10g00240 10 2217381 2219329 PCT
Gma03g01907 03 44970082 44972739 Gma10g00240 10 2217381 2219329 PCT
Gma10g00240 10 2217381 2219329 Gma19g01947 19 48607313 48608950 PCT
Gma10g00240 10 2217381 2219329 Gma03g01907 03 44970082 44972739 PCT