Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01907 ATGCACGTGAGATCAAGGGAATTTGGATATGTATACGCGGCCATGCACATGAACATGCATAGGGCAGGTGGTGTCACTGGCCCGCGGGCTGATGCATGGTGTCGGTGTCTAATTGGTGGAGATGTGGGGGGATTGGGGAGGCAAAACGAGACGACGTCGTGGAGGGCAAAGAGAACCTTTCCTTTTAGATTGAACTGTGTATTGTGTTGTGTGGGTTCCCGTTGGCCATTGACGGCAGCAGAGATCCGATCTGCTCTGCATCTCCCTCACACCACAGTGTCGCCGGTGATGATGGATCCGGCGATGACGCCGCTGGGGCAAATGCTATTGGAGGAGATCACTCCCGTGGTCATGCTCCTCTCAACTCCTTCCGTCGAAGAAGCTTCCCTCAAGAACGGCCTCTCCTTCCTCCAGACGCTAACGCCGTTCTGCTCCTTCAACAACATCGACGTTCCTGTTAGGACCGCCAGTGACCAACCTTATCGCCTTCACAAGTTCAAATTGCGTTTGTTCTACGCTTCCGATGTGAGGAAGCCCGATATGAAGGTAGCTAAAGAGCAGCTGAAGCAAGTTATCACAGAGGCAGGGGAGAAAGAGTTTTCTGAGTCTTGTTCAGATGTGTCGGAAATTAATCATGAATTTTCGTCGAGTTCTGAATACCAAAATACACCTTCCTGGTTTCGGTTTCTCAATAAAGAGCTTGTTCGTGTGGCTTCCTTTTCAGACCATGAAGCATTTGACCATCCTGTGATATGTCTTGTAGCTGTTTCATCAAAGGATGAACAACCTATTAGCAGATTTGTTGACCTTTTTAATACCAACAAGCTTCCTTCCCTTCTTAATGATGGTGCAATGGATCCAAAAGTTTCAAAGCGTTACTTGTTAGTGCATGATAATCAAGATGGCCCTGCAGACagAGCTAGTAAAATATTGACAGATATGAGGAGTACATTTGGGGCAAGTGACTGTTCGTTGCTTTGCATTAATTCTTCCCTGGATACTCCAATCAAAACTCAAGATAATCCTTGGGCTTCATATATAACTGATGCCTCACCTACTCCTAGTCAAGATCTTGGTTGCTTTCTTAACATTGATGATATCAACGAGATAAAAGATCTAATGCAAGATTTAGCATCCAAGTACATCATTCCAAATATGGAGCAAAAAATTCGTTTACTCAATCAACAGGTTTCTGCAACACGAAAAGGGTTTAAAAACCAAATAAAAAATTTATGGTGGAGAAAAGGGAAAGAAGACGGTGCAGATTCTCTCAATGGTCCCACGTATGACTTTAATTCCATTGAATCCCAGATTCGAGTTTTGGGTGATTATGCTTTCATGTTACGAGATTATGAACTTGCCTTGTCAAATTATCGCCTAATTTCCACCGATTACAAGATTGATAAAGCCTGGAAGCGTTATGCTGGTGTGCAGGAAATGATGGGACTTACGTACTTCATGTTGGATCAATCAAGAAAGGAAGCTGAGTATTGCATGGAAAATGCTTTTAACACATATTTAAAACTTGGATCGTTGGGTCAGCTAAATGCAACACGATGTGGTCTGTGGTGGATAGAAATGTTAAAGGCACGTGATCAATATAAGGAGGCAGCTACTGTTTATTTTCGTATTTGTGGTGAGGATATCCTACATTCTGCTGTGATGCTTGAACAAGCATCGTATTGCTACTTGTTGTCTAAACCCTCCATGTTACGCAAATATGGATTTCATCTAGTGCTTTCTGGTGAGCAGTATAAAAAGTGTGATCAGATCAAACATGCAATTCGAACATACAGAAGCGCTCTTTCTGTTTTTAGAGGAACTACTTGGAGTTATATAAATGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTATGACGTGGCTGTCAAGCATATGACGGAAATCCTGGCCTGTAGTCACCAGTCCAAGACAACACAGGAATTATTCCTGGGCGACTTTCTTCAAATTGTGGAGAAAACTGGACGGATGTTTGAGGTAACAAAACTTCAATTGCCTGTAATCAACATCTCTTCACTCAAGGTCATCTTCGAAGATTACCGAACTTTTGGAACACCTTCAGCTGCTAATACTAGAGAAGGCTTGTGGCGTTCTTTGGAGGAGGAAATGCTACCATCATTCTCTGCTGCCAAGACAAATTGGTTGGAGTTGCAATCAAAGCTTATCCCAAAGAAGCACAGTCAATCCAATGTTTGTGTTGTAGGCGAAGCTGTGACGGTGAATATCGAATTTAAAAATCCTCTACAAATCTCAATTCCCATATCTGGTGTTACACTTGTATGCAAGTATTCTGCCAGTACTGATGATGTTAGATCAGATGAGAATGAGTCAAGTGTGGAGAAAGATAATGAGGTTGACCACTTTGGGAATATGAGCTCTGACAGTTCCTCATTTATGGTGTCTGATGTTGATTTCTTACTAGGAGGTGGTGAAACAACCATGATTCAACTATCAGTTACTCCCAGGGCAGAGGGTTCTCTTGAAATTCTTGGTGTTAGGTGGAAATTGTCTGGTACAATAGTTGGCTTTCACAACTTTAAGTTGGGCCACCCAAAGAAGATTATAAAAGGAAGAAGGAAAAAAAATCACTTGCCAAATGAGAAATTTAAATTTATGGTGATTAAGAGCATACCCAAGCTTCAGGGTTCCATTCACCCTCTACCTGGAAAGACATATGCTGGAGATTTACGACAACTTGTTTTGGAATTGAGGAATCCATCAGAGTTTCCTGTTAAGAATCTGAAGATGAAGATAAGTCATCCTAGATTCCTGATAATTGGGAAACAAGAAAATATGAAGTCAGAGTTTCCTGCGTGCTTAAGAAAGAGGACAGTTGCAGTACCAAGTGATGTGTATGCTAATTCTAATATCATGTCTGACACAGTCTTTTTGTTTCCAGAGGGCACATCAGTTCAAGGTGAAACACCCTTCTTGTGGCCTCTTTGGTTTAGGGCTGCTGTTCCAGGTGATACATCACTTTACATGAGCATATATTATGAGATGGGAGATGCATCAAGTGTCATCAAGTATCGTACTCTTCGCTTGCATTACAATGTGCAGGTATTACCGTCGTTGGATGTCTCATTTCAAATAAGTCCTTCTCGATTAAAATTACAAGAATTTCTTGTTCGATTGGATGTTGTTAACAAGACTAGCTCAGAAAGTTTCCAAGTTTATCAGTTGTCGTCTGTTGGTCTCCACTGGGAAATCTCATTACTTCAAGCTCCTGATACTATTTTTCCTTCACAATCATTGAAGGCTGGCCAAGCAATATCTTGTTTCTTTACGCTAAAGAATTCTTCGAGGTTTTTGACATTGGAGGACAACATATCTACATTACCTGTCAGAAGTGATGTAAGATTGGTACCCCAAAGCAGTGAGGATTTAGTTTATGATATAAACAGTGCACCTTTGTTCAATTTCCACCATTATGAAAGATTGCAGCAGGAAGTTTCATATGAGGGTGACTTAAATACTGTTGATTTTGTATTGATCTCTCGGCCATTCAAGAGTAATGACGATCCGGGTTTTCCCAATCCTCCTCATGTTATGTCTCATCATGCGTGTCACTTCAGTACTGCTAGCACGGGCCCTATTTCATGGCTAGTGGATGGACCTCAAACCTTGCACCATGACTTCTCTGCATCGTTCTGTGAAATAAGTCTGAAGATGCATATTTACAATTCTTCTGGTGCCACTGCTTTTGTACGCATTGACACCTTAGATTCTGCTGGTAATGGGGGACACATGAACAGTGTAAATGTGGTTCAATCAGCAACTACTGATAACCAAGCAGGGTGGCATGATATTACACCAGTGAATGAACTGAAAGTCACATCAAATGTTCTTGAAACCCAACCAGGAAAGGCACCATCATTGGAAAGTGTGTCCTCATATATTTGGTCTGGATCAATCTCAACCAATCTCCACATTGATGCTATGTCCTCTGCAGAAATTCCTCTTCAGATCTGTGTGTTCTCTCCTGGGACATACGACCTGTCAAATTATGTTTTGAATTGGAAACTTCCATCCAATGGTAAGGGAGATAGTGATGAAACGAGGCAGCATTCAGGCAAGTGCCAGGGCTATAAATACTATCTTACCGTGCTTCAGTCCACTTGA 4158 0.4177 MHVRSREFGYVYAAMHMNMHRAGGVTGPRADAWCRCLIGGDVGGLGRQNETTSWRAKRTFPFRLNCVLCCVGSRWPLTAAEIRSALHLPHTTVSPVMMDPAMTPLGQMLLEEITPVVMLLSTPSVEEASLKNGLSFLQTLTPFCSFNNIDVPVRTASDQPYRLHKFKLRLFYASDVRKPDMKVAKEQLKQVITEAGEKEFSESCSDVSEINHEFSSSSEYQNTPSWFRFLNKELVRVASFSDHEAFDHPVICLVAVSSKDEQPISRFVDLFNTNKLPSLLNDGAMDPKVSKRYLLVHDNQDGPADRASKILTDMRSTFGASDCSLLCINSSLDTPIKTQDNPWASYITDASPTPSQDLGCFLNIDDINEIKDLMQDLASKYIIPNMEQKIRLLNQQVSATRKGFKNQIKNLWWRKGKEDGADSLNGPTYDFNSIESQIRVLGDYAFMLRDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLTYFMLDQSRKEAEYCMENAFNTYLKLGSLGQLNATRCGLWWIEMLKARDQYKEAATVYFRICGEDILHSAVMLEQASYCYLLSKPSMLRKYGFHLVLSGEQYKKCDQIKHAIRTYRSALSVFRGTTWSYINDHVHFHIGQWYASLGMYDVAVKHMTEILACSHQSKTTQELFLGDFLQIVEKTGRMFEVTKLQLPVINISSLKVIFEDYRTFGTPSAANTREGLWRSLEEEMLPSFSAAKTNWLELQSKLIPKKHSQSNVCVVGEAVTVNIEFKNPLQISIPISGVTLVCKYSASTDDVRSDENESSVEKDNEVDHFGNMSSDSSSFMVSDVDFLLGGGETTMIQLSVTPRAEGSLEILGVRWKLSGTIVGFHNFKLGHPKKIIKGRRKKNHLPNEKFKFMVIKSIPKLQGSIHPLPGKTYAGDLRQLVLELRNPSEFPVKNLKMKISHPRFLIIGKQENMKSEFPACLRKRTVAVPSDVYANSNIMSDTVFLFPEGTSVQGETPFLWPLWFRAAVPGDTSLYMSIYYEMGDASSVIKYRTLRLHYNVQVLPSLDVSFQISPSRLKLQEFLVRLDVVNKTSSESFQVYQLSSVGLHWEISLLQAPDTIFPSQSLKAGQAISCFFTLKNSSRFLTLEDNISTLPVRSDVRLVPQSSEDLVYDINSAPLFNFHHYERLQQEVSYEGDLNTVDFVLISRPFKSNDDPGFPNPPHVMSHHACHFSTASTGPISWLVDGPQTLHHDFSASFCEISLKMHIYNSSGATAFVRIDTLDSAGNGGHMNSVNVVQSATTDNQAGWHDITPVNELKVTSNVLETQPGKAPSLESVSSYIWSGSISTNLHIDAMSSAEIPLQICVFSPGTYDLSNYVLNWKLPSNGKGDSDETRQHSGKCQGYKYYLTVLQST 1385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01907 1385 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 285 618 IPR024420 -
Gma19g01907 1385 PANTHER TRANSPORT PROTEIN TRAPP 104 1384 IPR024420 -
Gma19g01907 1385 Gene3D Tetratricopeptide repeat domain 428 653 IPR011990 GO:0005515
Gma19g01907 1385 SUPERFAMILY TPR-like 529 650 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01907 Gma-Chr19 48245689 48269263 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01907 K20305 - gmx:100813062 2586.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01907 19 48245689 48269263 Gma03g01864 03 44605273 44625830 GST