Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01864 ATGATGATGATGGATCCGCCGATGACGCCGCTGGGGCAAATGCTATTGGAGGAGATCACTCCCGTCGTCATGCTCCTCTCAACTCCTTCCGTCGAACAAGTTTCCCTCAAGAACGGTCTCTCCTTCCTCCAGACGCTAACGCCGTTCTGCTCCTTCAACAACATCGACGTTCCTGTTAGGACCGCCAGTGACCAACCTTATCGCCTTCACAAGTTCAAATTGCGTTTGTTCTACGCTTCCGATGTGAGGAAGCCTGATTTGAAGGTAGTAGCTAAAGAGCAAGTGAAGCAAGTTATCACAGAGGCAGGGGAGAAAGAGTTTTCTGAGTCGTGTTCAGATGTGTCAGAAATTAATCATGAACTTTCGTCGAGTTCCGAATACCAACATACACCATCCTGGTTTCGGTTTCTCAATAAAGAACTTGTTCGTGTGGCTTCCTTTTCAGACCATGAAGCATTTGACCATCCTGTGATATGTCTTGTTGCTGTTTCATCAAAGGATGAACAGCCTATTAGCAGATTTGTTGACCTTTGTAATGCCAACAAGCTTCCTTCCCTTCTTAATGATGGTGCAATGGATCCAAAAATTTCAAAGCATTACTTGTTAGTGCATGATAATCAAGATGGCCCTGCAGACAGAGCAAGTAAAATATTGACAGATATCAGGAGTACATTTGGTGCAAGTGACTGTTCATTGCTTTGCATTAATTCTTCCCTGGATGCTCCAATCAAACATCAAGATAATCCTTGGGCTTCATATATAACTGATGCCTCACCTACTCATAGTCAAGATTTTGGTTGCTTTCTCAACATTGATGATATCAACGAGATCAAAGATCTAATGCAAGATTTAGCATCTAAGCACATCATTCCAAATATGGAGCAAAAAATTCGTGTACTCAATCAACAGGTTTCTGCCACACGAAAAGGGTTTAAAAACCAAATAAAAAATTTATGGTGGAGAAAAGGGAAAGAAGATGGTGCAGATTCTCTCAATGGTCCCACGTATGACTTTAATTCCATTGAATCCCAGATTCGAGTTTTGGGTGATTATGCTTTCATGTTACGAGATTATGAACTTGCCTTGTCAAATTATCGCCTAATTTCCACAGATTACAAGATTGATAAAGCCTGGAAGCGTTATGCTGGTGTGCAGGAAATGATGGGACTTACATACTTCATATTGGATCAATCAAGAAAGGAAGCTGAGTATTGCATGGAAAATGCTTTTAACACATATTTAAAACTTGGATCATTGGGTCAGCTAAATGCAACAAGATGTGGTCTGTGGTGGATAGAAATGTTAAAGGCACGTGATCAATATAAGGAGGCTGCTACTGTTTATTTTCGTATTTGTGGTGAGGATATCCTACATTCTGCTGTGATGCTTGAACAAGCATCATACTGCTACTTGTTGTCTAAACCCTCCATGTTACACAAATATGGATTTCATCTAGTGCTTTCTGGTGAGCAGTATAAAAAGTGTGATCAGATCAAACATGCAATTCGAACATACAGAAGTGCTCTTTCTGTTTTTAGAGGAACTACTTGGAGTTATATAAATGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTATGATGTGGCTGTCAAGCATATGATGGAAATCTTGGCCTGTAGTCACCAGTCCAAGACAACACAGGAATTATTCCTGGGCGACTTTCTTCAAATTGTCGAGAAAACTGGACGGACGTTTGAGGTAACAAAACTTCAATTGCCTGTAATCAACATCTCTTCACTGAAGATCATCTTCGAAGATTACCGAACTTTTGGAACATCTTCAGCTGCTAATACTAGAGAAGGCTTGTGGCACTCTTTGGAGGAAGAAATGCTACCATCATTCTCTTCTGCCAAGACAAATTGGTTGGAGTTGCAATCAAAGCTTATCTCAAAAAAGCACAGTCAATCGAATGTTTGTGTTGCAGGCGAAGCTGTGAATGTGAATATTGAATTTAAAAATCCTCTGCAAATCTCAATTCCCATATCTGGTGTTACACTTGTATGCAAGTATTCTGCCAGTACTGGTGATATTAGATCAGATGAGAATGAGTCAAGTGTGGAGAAAGATAATGAGGTTGACCACTTTAGGAATATGAGCTCCGACAATTCCTCATTTATGGTGTCCGAGGTTGATTTCTTACTAGGAGGCGGTGAAACAACCATGATACAACTATCAGTTACTCCCAGGGCAGAGGGTACTCTTGAAATTCTTGGTGTTAGGTGGAAACTGTCTGGTACAATAGTTGGCTTTCACAACTTTGAGTTGTGCCACCCAAAGAAGATTATAAAAGGAAGAAGGAAAACAAAGCACATGCCAAATGAGAAATTTAAATTTATGGTGATTAAGAGCATACCCAAGCTTCAGGGTTCCATTCACCCTCTACCTGGAAAGGCGTATGCTGGAGATTTACGACAACTTGTTTTGGAATTGAGGAATCCATCAGACTTTCCTGTTAAGAATCTGAAGATGAAGATAAGTCATCCTAGATTCCTGATAATTGGGAAGCAGGAAAATAGGAAGTCAGAGTTTCCTGCGTGCTTAAGAAAGAGAACAGATGCAGTACTAAGTGATGTGTATGCTAATCCTAACATCATGTCTGACACAGTCTTTTTGTTTCCAGAGGGCACATCAGTTCAAGGTGAAGCACCCTTCTTGTGGCCTCTTTGGTTTAGGGCTGCTGTTCCTGGTGATATATCACTTTACATGAGCATATATTATGAGATGGGAGATGCATCAAGTGTCATCAAATATCGTACTCTTCGCTTGCATTACAATCTGCAGGTATTACCATCGTTGGATGTCTCATTTCAAATAAGTCCTTCTCGATTAAGATTACAAGAATTTCTCGTTCAATTGGATGTTGTTAACAAGACTAGCTCAGAAAGTTTCCAAGTTTATCAGTTGTCGTCAGTTGGTCACCGCTGGGAAATCTCGTTACTTCAAGCTCCTGATACTATTTTTCCTTCACAATCATTGAAGGCTGGCCAAGCAATATCTTGTTTCTTTACACTAAAGAATTCTTCGAGGTTTTCGACATTGGAGGACAACATATCTACATTGCCTGTCAGAAGTGATGTAAGATTGGTACCCCAAAGCAGTGAGGATTTAGTTTACGATATAAACAGTGCACCTTTGTTCAATTTCCACCATTATGAAAGATTGCAGCAGAAAGTTACATATGAGGGTGACTTAAATACTGTTGATTTTGTATTGATCTCTCGGCCATTCAAGAGTAATGACGATCCTGGTTTTTCCAATCCTCCTCATGTTATGTCTCATCATGCGTGTCACTTCAGTACTGCTAGCACGGGCCCTATTTCATGGCTAGTGGATGGACCTCAAACCTTACATCATGACTTCTCTGCATCATTCTGTGAAATAAGTCTGAAGATGCATATTTACAATTCTTCTGGTTCCACTGTTTTTGTACGCATTGACACCTTAGATTCTGCTGGTAATGGTGGGCACATGAACAGTGTAAATGTGGTTCAATCAGCAACTAGTGATAACCGAGCAGGGTGGCATGATATTACACCAGTGAATGAACTCAAAGTCACATCAAATGTTCTTGGAACCCAACCAGGAAAGGCACTATCATTGGAAAGTGTGCCTTCATATATTTGGTCTGGATCAAGCTCAACCAATCTCCACATTGATGCTATGTCCTCAGCAGAAATTCCTCTTCAGATCTGTGTGTTTTCCCCAGGGACATATGACCTGTCAAATTATGTTTTGAATTGGAAACATCCATCCAATGGTCAGGGAGACAGTGATGAAACGAAGCAGCATTCAGGCAAGTGCCAGGGCTATAAATACTATCTTACCGTGCTTCAGTCCACTTGA 3879 0.406 MMMMDPPMTPLGQMLLEEITPVVMLLSTPSVEQVSLKNGLSFLQTLTPFCSFNNIDVPVRTASDQPYRLHKFKLRLFYASDVRKPDLKVVAKEQVKQVITEAGEKEFSESCSDVSEINHELSSSSEYQHTPSWFRFLNKELVRVASFSDHEAFDHPVICLVAVSSKDEQPISRFVDLCNANKLPSLLNDGAMDPKISKHYLLVHDNQDGPADRASKILTDIRSTFGASDCSLLCINSSLDAPIKHQDNPWASYITDASPTHSQDFGCFLNIDDINEIKDLMQDLASKHIIPNMEQKIRVLNQQVSATRKGFKNQIKNLWWRKGKEDGADSLNGPTYDFNSIESQIRVLGDYAFMLRDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLTYFILDQSRKEAEYCMENAFNTYLKLGSLGQLNATRCGLWWIEMLKARDQYKEAATVYFRICGEDILHSAVMLEQASYCYLLSKPSMLHKYGFHLVLSGEQYKKCDQIKHAIRTYRSALSVFRGTTWSYINDHVHFHIGQWYASLGMYDVAVKHMMEILACSHQSKTTQELFLGDFLQIVEKTGRTFEVTKLQLPVINISSLKIIFEDYRTFGTSSAANTREGLWHSLEEEMLPSFSSAKTNWLELQSKLISKKHSQSNVCVAGEAVNVNIEFKNPLQISIPISGVTLVCKYSASTGDIRSDENESSVEKDNEVDHFRNMSSDNSSFMVSEVDFLLGGGETTMIQLSVTPRAEGTLEILGVRWKLSGTIVGFHNFELCHPKKIIKGRRKTKHMPNEKFKFMVIKSIPKLQGSIHPLPGKAYAGDLRQLVLELRNPSDFPVKNLKMKISHPRFLIIGKQENRKSEFPACLRKRTDAVLSDVYANPNIMSDTVFLFPEGTSVQGEAPFLWPLWFRAAVPGDISLYMSIYYEMGDASSVIKYRTLRLHYNLQVLPSLDVSFQISPSRLRLQEFLVQLDVVNKTSSESFQVYQLSSVGHRWEISLLQAPDTIFPSQSLKAGQAISCFFTLKNSSRFSTLEDNISTLPVRSDVRLVPQSSEDLVYDINSAPLFNFHHYERLQQKVTYEGDLNTVDFVLISRPFKSNDDPGFSNPPHVMSHHACHFSTASTGPISWLVDGPQTLHHDFSASFCEISLKMHIYNSSGSTVFVRIDTLDSAGNGGHMNSVNVVQSATSDNRAGWHDITPVNELKVTSNVLGTQPGKALSLESVPSYIWSGSSSTNLHIDAMSSAEIPLQICVFSPGTYDLSNYVLNWKHPSNGQGDSDETKQHSGKCQGYKYYLTVLQST 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01864 1292 Gene3D Tetratricopeptide repeat domain 336 560 IPR011990 GO:0005515
Gma03g01864 1292 PANTHER TRANSPORT PROTEIN TRAPP 10 1291 IPR024420 -
Gma03g01864 1292 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 644 834 IPR013935 -
Gma03g01864 1292 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 192 525 IPR024420 -
Gma03g01864 1292 SUPERFAMILY TPR-like 436 557 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01864 Gma-Chr3 44605273 44625830 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01864 K20305 - gmx:100809666 2605.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01907 19 48245689 48269263 Gma03g01864 03 44605273 44625830 GST