Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01877 ATGGCCCAATCCCATGGATCCATCCTCACTCGATCAGTGTGGTCCTCCAATCTGGAATCGGAGTTCGACTTAATCCGATCTGTCATCGACTCCTTCCCTCTCATCTCGATGGACACCGAGTTCCCCGGCGTCGTCGTGCGCCCCGATGCTTGCGACCCCTCCTTCCGCCATCGCCAACCCGCCGCGCACTACGCCGTGCTCAAAGCCAACGTGGATCGCCTCCACCTGATCCAGATCGGCCTCACCCTCTCCGACAACGCGGGAAACCTTCCCACCCTCGGCACCTCCAACGCCTTCATCTGGGAATTCAACTTCAGAGATTTCGACGTCGTGCGTGACGCCCACGCCCACGACTCTGTCGAGTTGCTGCGTCGCCAGGGCATCGATTTCGAGAAGAATCGCGACTTTGGGATCGACTCGTTCCGGTTCGCAGAACTGATGATGTCGTCCGGTCTGGTATGCGACAACGCCGTTAGCTGGGTGACTTTTCACAGCGCGTACGATTTCGGATATTTGGTGAAATTGTTGACGCATCGCGCATTGCCAGAGGAATTAAGAGAGTTTCTCCGTCTAGTGAGGGTGTTTTTCGGAGACAGAGTCTTTGATGTGAAGCATTTGATGAGGTTTTGCTCAAACCTGCATGGTGGATTGAACCGAGTTTGTCAGTCGCTGAAGGTGGAGCGCGTCTTAGGGAAAAGTCATCAGGCTGGTTCTGATAGTTTGCTCACTCTGCACGCTTTTCAGAATATCAGAGAGATTTACTTTGGCAAGGCTGATGGGCTTGTTCAGTACGCTGGTGTCTTGTATGGTTTGGACGTTTTCTGA 825 0.5382 MAQSHGSILTRSVWSSNLESEFDLIRSVIDSFPLISMDTEFPGVVVRPDACDPSFRHRQPAAHYAVLKANVDRLHLIQIGLTLSDNAGNLPTLGTSNAFIWEFNFRDFDVVRDAHAHDSVELLRRQGIDFEKNRDFGIDSFRFAELMMSSGLVCDNAVSWVTFHSAYDFGYLVKLLTHRALPEELREFLRLVRVFFGDRVFDVKHLMRFCSNLHGGLNRVCQSLKVERVLGKSHQAGSDSLLTLHAFQNIREIYFGKADGLVQYAGVLYGLDVF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01877 274 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 3 273 - -
Gma19g01877 274 Gene3D - 1 273 IPR036397 GO:0003676
Gma19g01877 274 Pfam CAF1 family ribonuclease 13 138 IPR006941 -
Gma19g01877 274 SUPERFAMILY Ribonuclease H-like 3 272 IPR012337 -
Gma19g01877 274 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 273 IPR039637 GO:0004535|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01877 Gma-Chr19 47993541 47994721 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01877 K12581 - gmx:100805583 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01877 19 47993541 47994721 Gma19g01877 19 47993541 47994721 ECH
Gma19g01877 19 47993541 47994721 Gma03g01836 03 44371600 44379952 GST