Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01876 ATGACGCTTGGTTCTTCAGGATCCAGTGTCGTGGTTCCAAGGAACTTCAGATTGCTGGAGGAGCTTGAGAAGGGAGAAAAAGGAATAGGAGATGGCACAGTTAGTTATGGAATGGATGATGGTGATGACATTTACATGCGCTCTTGGACTGGAACCATTATTGGTCCCTATAATACTGTACATGAAGGAAGAATTTATCAATTGAAGCTGTTTTGTGATAAAGACTACCCTGAAAAGCCCCCGAGCGTCCGGTTTCATTCACGGATCAATATGACTTGTGTTAATCATGAAACTGGAGTGGTTGAATCAAAGAAATTTGGTCTTCTTGCAAATTGGCAACAGAGGTTTACCATGGAAGATATACTGACCCAGCTGAAGAAGGAAATGGCGGCTTCACATAACCGCAAGCTTGTCCAACCTCCTGAAGGTACTCACTATTAG 441 0.4308 MTLGSSGSSVVVPRNFRLLEELEKGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPYNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVESKKFGLLANWQQRFTMEDILTQLKKEMAASHNRKLVQPPEGTHY 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01876 146 Pfam Ubiquitin-conjugating enzyme 43 132 IPR000608 -
Gma19g01876 146 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 13 146 IPR000608 -
Gma19g01876 146 Gene3D Ubiquitin Conjugating Enzyme 3 146 IPR016135 -
Gma19g01876 146 PANTHER - 9 140 - -
Gma19g01876 146 SMART ubc_7 16 146 - -
Gma19g01876 146 SUPERFAMILY UBC-like 11 146 IPR016135 -
Gma19g01876 146 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 9 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01876 Gma-Chr19 47986656 47991242 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01876 K10704 - gmx:100306398 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01876 19 47986656 47991242 Gma19g01876 19 47986656 47991242 ECH
Gma19g01876 19 47986656 47991242 Gma10g00712 10 8619275 8622003 PCT
Gma19g01876 19 47986656 47991242 Gma02g01899 02 44041211 44045871 PCT
Gma10g00712 10 8619275 8622003 Gma19g01876 19 47986656 47991242 PCT
Gma02g01899 02 44041211 44045871 Gma19g01876 19 47986656 47991242 PCT