Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01899 ATGACGCTTGGCTCAGGAGGATCCAGTGTCGTTGTTCCTAGGAACTTCAGATTGCTGGAGGAGCTTGAACGTGGTGAAAAAGGAATTGGAGATGGCACAGTTAGCTATGGAATGGATGATGGTGATGACATTTACATGCGCTCTTGGACTGGCACGATTATTGGCCCCCATAATACTGTACATGAAGGAAGAATTTATCAACTGAAGCTGTTTTGTGATAAAGACTACCCAGAAAAGCCCCCTAGTGTTCGGTTTCATTCACGGATCAACATGACTTGTGTTAATCATGAAACTGGAGTGGTTGAACCAAAGAAATTTGGTCTTCTTGCAAATTGGCAAAGAGAGTACACCATGGAGGACATACTGACCCAGCTGAAGAAGGAAATGGCCGCTCCTCATAACCGGAAGCTTGTCCAACCTCCAGAAGTCAACATGATCAAACTTGGTTCCTTTTGGCTACAAATAACAAAATTTATGCTTTGGGGAATCAGAGAAGAAAGAAGGCCTGGAGGATACATACGCCGTCGCCATTGTCGTCTGCAAGCTCCGCCACAACCGCTACAAGCTCTT 570 0.4526 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEVNMIKLGSFWLQITKFMLWGIREERRPGGYIRRRHCRLQAPPQPLQAL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01899 190 SUPERFAMILY UBC-like 11 145 IPR016135 -
Gma02g01899 190 Gene3D Ubiquitin Conjugating Enzyme 4 147 IPR016135 -
Gma02g01899 190 PANTHER - 10 140 - -
Gma02g01899 190 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 13 167 IPR000608 -
Gma02g01899 190 SMART ubc_7 16 165 - -
Gma02g01899 190 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 10 140 - -
Gma02g01899 190 Pfam Ubiquitin-conjugating enzyme 43 138 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01899 Gma-Chr2 44041211 44045871 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01899 K10704 - pvy:116143857 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01899 02 44041211 44045871 Gma02g01899 02 44041211 44045871 ECH
Gma10g00712 10 8619275 8622003 Gma02g01899 02 44041211 44045871 GST
Gma19g01876 19 47986656 47991242 Gma02g01899 02 44041211 44045871 PCT
Gma02g01899 02 44041211 44045871 Gma19g01876 19 47986656 47991242 PCT