Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01861 ATGCGCCGCGACAAAAGCCCACGCTTTGCCATTGGTAGTTACTTGGAACACTACAGCAACAAGGTTGAGCTTGTCCATCACTTCAACCACGACACGTTCAACTTCACCTCCGACCCTCGTTTGGTGCTCAACCACCCTTACGAGCCAATTCTAGGGTACACACAACATGCACCATTTGGACGAACAGGTGATGGTTCTGTGAGGGTGTTTGATTTAAGAGACAAAGAGAAATCGACCATAATATATGAAAATGCAGTGCATGGTTGTCCCTTGCTTCGTTTGAATGGAATAAAAGTGACCCAAGATTCTGGGAGACATTTGTGCTCTCTTAGTGATGATGCAAGGGCCTTCATTTGGGAGGTGATGGACATAGGGTTCTCTTCAGGGAATGGTTGTGATGTGCTCGAAAGTGGAAGGAAAAAGGGAGGGTCAAAATTCCGCCGGAGAAAATCTTTGTTCGGTATTTGCAATCGGGAGAGGCGAGCGAGCGAGCGGGCGAGAGACATAAGGTCCCTTCTCAGGCATGGCGATGACAGTACACGCCTTGCTGGGTTGGCTTTTATGTTTTCAGCTAGCATTTTGCTTCAGATTCTGGCATGTGCAATATATAACAATTGGTGGCCAATGTTATCAGCTCTGATGTATGTGCTTGTTCCTATGCCTTGCTTATTCTTTGGAGGTGGATCCACTCAATTTCTAATGACCCGTGATGGTGGTGGTTGGATAGATGCTGCAAAATTTTTGACTGGAGCATCAGCTGTTGGGAGCTTAGCCATTCCTATCATTCTCAAGCACGCTCATATGATTGAGACAGGCGCGATGCTCATTGAGCTTGTATCATTCTTCATATTTATATGTACTGTTTTATGTTTCCACCAAGCCAGCCTTGATGATGATTGGTAA 903 0.4574 MRRDKSPRFAIGSYLEHYSNKVELVHHFNHDTFNFTSDPRLVLNHPYEPILGYTQHAPFGRTGDGSVRVFDLRDKEKSTIIYENAVHGCPLLRLNGIKVTQDSGRHLCSLSDDARAFIWEVMDIGFSSGNGCDVLESGRKKGGSKFRRRKSLFGICNRERRASERARDIRSLLRHGDDSTRLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMTRDGGGWIDAAKFLTGASAVGSLAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQASLDDDW 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01861 300 PANTHER RH04491P 182 299 - -
Gma19g01861 300 Pfam Vacuolar protein sorting 55 183 294 IPR007262 -
Gma19g01861 300 PANTHER LEPTIN RECEPTOR-RELATED 182 299 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01861 Gma-Chr19 47812577 47817960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01861 168 295 EF-hand Containing Proteins AT1G32410 53.435 5.91e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01861 - - pvu:PHAVU_001G192100g 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01861 19 47812577 47817960 Gma19g01861 19 47812577 47817960 ECH
Gma19g01861 19 47812577 47817960 Gma03g01819 03 44226806 44232441 GST