Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01852 atgagcaggtcagggcaaccaccggatttgaagaagtacatggataagaagcttcagaTCAAGCTGAACGCAAATCGCATGGTTGTTGGTACTCTCCGTGGCTTTGACCAGTTTATGAATTTAGTTGTTGACAACACTGTGgaagtgaatggcaatgagaaaaatgacatagggatggtggtaattagaggaaatagtgtggtcactgttgaggcgcttgaaCCCGTGAATAGGACTTGA 240 0.1875 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPVNRT 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01852 79 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN G 1 79 - -
Gma19g01852 79 CDD Sm_G 6 74 IPR034098 GO:0000387|GO:0005681
Gma19g01852 79 PIRSF Lsm7 5 78 - -
Gma19g01852 79 SUPERFAMILY Sm-like ribonucleoproteins 9 76 IPR010920 -
Gma19g01852 79 SMART Sm3 8 72 IPR001163 -
Gma19g01852 79 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 1 79 IPR044641 -
Gma19g01852 79 Gene3D - 1 76 - -
Gma19g01852 79 Pfam LSM domain 9 71 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01852 Gma-Chr19 47753019 47754443 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01852 K11099 - gmx:100305530 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01852 19 47753019 47754443 Gma19g01852 19 47753019 47754443 ECH
Gma19g01852 19 47753019 47754443 Gma03g01810 03 44147332 44149394 GST