Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01810 ATGCTCACAAGGCCATGTCGTGGTGGTAGTGGGTCATGGGGAAGGCTGGAAGGGAGACTGCACGGTGGTGTGGTGGTGGCTAATCTATGGGACGACGTGGGTTATGCTTGTGTGTGGCAGCGCAAGGAAGACTGGAATAGAGTTAGGGTGCTCACATTTTGTTATGggcaaccaccggatttgaagaagtacatggacaagaagcttcagaTCAAGCTGAATGCAAATCGCATGGTTGTTGGTACTCTCCGTGGCTTCGACCAGTTTATGAATTTAGTTGTTGACAACACTGTGgaagtgaatggcaatgagaaaaatgacatagggatggtggtaatcagaggaaatagtgtggtcactgttgaggcgcttgaaCCTGTGAACAGGACTTGA 393 0.341 MLTRPCRGGSGSWGRLEGRLHGGVVVANLWDDVGYACVWQRKEDWNRVRVLTFCYGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPVNRT 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01810 130 Pfam LSM domain 60 122 IPR001163 -
Gma03g01810 130 SUPERFAMILY Sm-like ribonucleoproteins 60 127 IPR010920 -
Gma03g01810 130 Gene3D - 55 127 - -
Gma03g01810 130 SMART Sm3 59 123 IPR001163 -
Gma03g01810 130 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN G 51 130 - -
Gma03g01810 130 CDD Sm_G 57 125 IPR034098 GO:0000387|GO:0005681
Gma03g01810 130 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 51 130 IPR044641 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01810 Gma-Chr3 44147332 44149394 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01810 K11099 - gmx:100305530 151.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01810 03 44147332 44149394 Gma03g01810 03 44147332 44149394 ECH
Gma19g01852 19 47753019 47754443 Gma03g01810 03 44147332 44149394 GST