Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01829 ATGGGGATGCGAATGCGTGTGCCAGGATTCATGCTTTTGCTAATCATCGGAATCTTCGAACTCGATGCTGTTTATGGTTACGTTCGACCACCACCTCGTAAAACACTCTTTGTTCCACATGCAGATCAGGATTCCCACTCGCCTCAACAGGTACACATATCTCAAGTGGGCCAAAACAAGATGAGGATATCATGGATCACAGACAGCCCAACTCCTGCAAAGGTTATGTACGCTCCATCTCCTTCAGGTAATACAGTCTCTGCCACAGGAACTACCTCTTCGTATCGTTATCTGGTCTACGAGTCTGGTGAAATTCACAACGTCGTAATTGGTCCCCTCAACCCCAACACTGTCTACTACTACCGTTTGGGTGACCCACCTTCTTCCCAAACATACAACTTTAAGACTCCACCCTCCCAACTTCCAATCAAATTTGCAATAGTTGGAGATCTTGGACAAACAGATTGGACCAAGTCAACTTTGGAGCATGTGAAGAAGTCAAACTACGACATGTTGTTATTGCCTGGTGATCTATCCTACGCAGACTTCAACCAAGATCTATGGGACTCCTTTGGTCGATTAGTTGAACCATTAGCTAGCCAACGTCCTTGGATGGTCACCCAAGGCAACCACGAGGTCGAGACGATTCCATTGCTTCACAAAACACCATTCACAGCCTACAATGCTAGGTGGCTCATGCCATTCCAAGAAAGTGGATCAAACTCTAATCTTTATTATTCTTTCGATGTGGCTGGTGTTCATGTCATCATGCTTGGCTCCTACACTGACTTTGACCCTTCTTCTCCACAATACAAATGGCTTCAAAATGACTTGCAAACGGTAAACAAGAGAACAACTCCTTGGATTGTAGTATTGATTCACGCCCCGTGGTACAACTCTAACACTGCTCATCAAGGTGAGCCTGAATCCATTAACATGAAGGTTGCCATGGAAGATTTGCTCTATCAAGCCCGCGTTGATGTTGTTTTTGCAGGGCATGTTCATGCCTATGAGCGTTTTACACGTGTTTATAAAGACAAGGCTAACAATTGTGCTCCGATGTACATCACAATCGGAGATGGGGGAAATCGTGAAGGCCTTGCTACTAAGTACATGGATCCCAAGCCAACGATATCAATATTCAGGGAGGCTAGCTTTGGACATGGTACGTTAGAAGTATTTAACGTATCTCATGCACGCTGGACCTGGCATAAGAATGATAACGATGAAGCAGTTGATAGTGATTTTGTGTGGCTTACAAGTTTCTCCTCTATTCCTTCCTGTAAATAG 1290 0.4465 MGMRMRVPGFMLLLIIGIFELDAVYGYVRPPPRKTLFVPHADQDSHSPQQVHISQVGQNKMRISWITDSPTPAKVMYAPSPSGNTVSATGTTSSYRYLVYESGEIHNVVIGPLNPNTVYYYRLGDPPSSQTYNFKTPPSQLPIKFAIVGDLGQTDWTKSTLEHVKKSNYDMLLLPGDLSYADFNQDLWDSFGRLVEPLASQRPWMVTQGNHEVETIPLLHKTPFTAYNARWLMPFQESGSNSNLYYSFDVAGVHVIMLGSYTDFDPSSPQYKWLQNDLQTVNKRTTPWIVVLIHAPWYNSNTAHQGEPESINMKVAMEDLLYQARVDVVFAGHVHAYERFTRVYKDKANNCAPMYITIGDGGNREGLATKYMDPKPTISIFREASFGHGTLEVFNVSHARWTWHKNDNDEAVDSDFVWLTSFSSIPSCK 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01829 429 Pfam Calcineurin-like phosphoesterase 144 337 IPR004843 GO:0016787
Gma19g01829 429 Pfam Iron/zinc purple acid phosphatase-like protein C 352 414 IPR025733 -
Gma19g01829 429 SUPERFAMILY Metallo-dependent phosphatases 142 412 IPR029052 -
Gma19g01829 429 PANTHER PURPLE ACID PHOSPHATASE 11 427 - -
Gma19g01829 429 SUPERFAMILY Purple acid phosphatase, N-terminal domain 34 138 IPR008963 GO:0003993|GO:0046872
Gma19g01829 429 PANTHER ACID PHOSPHATASE RELATED 11 427 IPR039331 GO:0003993
Gma19g01829 429 CDD MPP_PAPs 142 421 IPR041792 -
Gma19g01829 429 Pfam Purple acid Phosphatase, N-terminal domain 48 136 IPR015914 GO:0003993|GO:0046872
Gma19g01829 429 Gene3D - 47 139 - -
Gma19g01829 429 Gene3D - 140 427 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01829 Gma-Chr19 47564089 47567400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01829 48 388 Miscellaneous Gene Families AT2G03450 25.061 1.15e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01829 K22390 - gmx:100790228 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01829 19 47564089 47567400 Gma19g01829 19 47564089 47567400 ECH
Gma19g01829 19 47564089 47567400 Gma03g01786 03 43972908 43987624 GST