Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01786 ATGAAGATGCAAATGCGCGTGCCAGGGTTCTTGTTGTTCTTGCTAACCATCGGAATCTTCGAAGTCGATGCCGTTTATGGTTACGTTCGACCACCACCTCGTAAAACACTTTTTGTTCCACATGCAAATCAGGATTCCCACTCGCCTCAACAGGTACACATATCTCAAGTGGGCCAAAACAAGATGAGGATATCATGGATCACAGATAGCCCAACTCCTGCAAAGGTTTCGTATGGTCCATCTCCTTCGGTTAATGCATCCTCTGCCATAGGAACTACCTCCTCGTACCGTTATCTGGTCTACGAGTCTGGTGAAATTCACAACGTGGTAATTGGTCCCCTCAACCCCAACACTGTCTACTATTACCGTTTGGGTGACCCACCCTCTTCCCAAACATACAACTTTAAGACTCCATCATCCCAACTTCCTATCAAATTTGCAGTAGTTGGAGATCTTGGACAAACGGATTGGACCAGATCAACCTTGGAGCATGTGAATAAGTCAAACTATGACATGTTGTTACTGCCTGGTGATCTATCCTACGCAGACTTCATCCAAGATCTATGGGACTCCTTTGGTCGATTGGTTGAACCATTAGCTAGCCAACGTCCTTGGATGGTAACCCAAGGCAACCACGAGGTTGAGATGATTCCACTGATTCACACAACACCATTCACGGCATACAATGCTAGGTGGCTCATGCCATTCCAAGAAAGTGGATCAAACTCAAATCTCTACTATTCTTTCGATGTGGCTGGCGTTCATGTCATCATGCTTGGCTCTTACACTGACTTTGACTCTTCTTCTCCACAATACAAATGGCTTCAAAATGACTTGCAGAAGGTAAATAGAAGAATAACTCCTTGGGTTGTAGTATTGATTCATGCCCCGTGGTACAACTCCAACACCGCTCATCAAGGTGAGCCTGAATCCGTAAACATGAAGGCTTCCATGGAAGATTTGCTCTATCAAGCCCGCGTTGATGTTGTTTTTGAAGGACATGTGCATGCCTATGAGCGCTTTACACGGGTTTATAAAGACAAAGCTAACAATTGTGCTCCGATGTACATCACAATCGGAGATGGGGGAAACCGTGAAGGCCTTGCTACTAAGTACATAAATCCCAAGCCAACAATATCAATATTCAGGGAGGCTAGCTTTGGACACGGTACTTTGGAGGTACACATATCTCAATTGGGCCAAAACAAGATGAGGATATCATGGATCACAGGTGGTGCATGTCATGATCATTCGAAGAAAGTGGATGAAACTCTAACCTCTTTTATTCTTTTCATGTGGCTGGCGTTCATGTCATCATGCTTGGCTCCTACACCGACTTTGACTCTTATTCTCCACAATACAAATGGCTTCAAAATGACTTGCGGAAGGGTTTATAAAGACAAAGCTAACAATTGTGCTCCAGTTCAATTCATATCACAATTGGAGACGGGGGAAACCATGAAGGCCTTGCTACCAAGAGTCTTAAGTCCCCGACGCACTCCAATTTATAATTACTTCGAACAAACTTTGGGGTATGTGACATTAAAATCTGGATATTTTGCTTCCACCACCAAAGTTTTCAACCAACTTTCTCCAAAAGGACAGGGCACTGTGAATAGTTTCTGGGAAGGAATTGTTCTCACAATCATGGAAAGGCTGAACTCAGAGTTGTACTACCAGAACTGTCACATGATCAAAGAGAATGAAAGGCTGAGGAAGAAAGCTCAGCTTCTTAATCAAGAAAATCAACAACTTCTGTCTGAACTAAAAAAGAAGCTCTCCAAGGGAAATGCAAAAACCAATGCTGCTCCAAACACCATTCTTGACCTGAACCTTGGATCAAGTTCTAGTCATAATCCTTCTGGTTCCAGCAATTAA 1878 0.435 MKMQMRVPGFLLFLLTIGIFEVDAVYGYVRPPPRKTLFVPHANQDSHSPQQVHISQVGQNKMRISWITDSPTPAKVSYGPSPSVNASSAIGTTSSYRYLVYESGEIHNVVIGPLNPNTVYYYRLGDPPSSQTYNFKTPSSQLPIKFAVVGDLGQTDWTRSTLEHVNKSNYDMLLLPGDLSYADFIQDLWDSFGRLVEPLASQRPWMVTQGNHEVEMIPLIHTTPFTAYNARWLMPFQESGSNSNLYYSFDVAGVHVIMLGSYTDFDSSSPQYKWLQNDLQKVNRRITPWVVVLIHAPWYNSNTAHQGEPESVNMKASMEDLLYQARVDVVFEGHVHAYERFTRVYKDKANNCAPMYITIGDGGNREGLATKYINPKPTISIFREASFGHGTLEVHISQLGQNKMRISWITGGACHDHSKKVDETLTSFILFMWLAFMSSCLAPTPTLTLILHNTNGFKMTCGRVYKDKANNCAPVQFISQLETGETMKALLPRVLSPRRTPIYNYFEQTLGYVTLKSGYFASTTKVFNQLSPKGQGTVNSFWEGIVLTIMERLNSELYYQNCHMIKENERLRKKAQLLNQENQQLLSELKKKLSKGNAKTNAAPNTILDLNLGSSSSHNPSGSSN 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01786 625 MobiDBLite consensus disorder prediction 596 625 - -
Gma03g01786 625 CDD MPP_PAPs 143 412 IPR041792 -
Gma03g01786 625 PANTHER PURPLE ACID PHOSPHATASE 22 394 - -
Gma03g01786 625 SUPERFAMILY Metallo-dependent phosphatases 143 395 IPR029052 -
Gma03g01786 625 Pfam Calcineurin-like phosphoesterase 145 338 IPR004843 GO:0016787
Gma03g01786 625 SUPERFAMILY Purple acid phosphatase, N-terminal domain 35 138 IPR008963 GO:0003993|GO:0046872
Gma03g01786 625 Pfam Iron/zinc purple acid phosphatase-like protein C 353 398 IPR025733 -
Gma03g01786 625 Pfam Purple acid Phosphatase, N-terminal domain 49 137 IPR015914 GO:0003993|GO:0046872
Gma03g01786 625 MobiDBLite consensus disorder prediction 598 625 - -
Gma03g01786 625 Gene3D - 140 425 IPR029052 -
Gma03g01786 625 Coils Coil 568 595 - -
Gma03g01786 625 Gene3D - 48 139 - -
Gma03g01786 625 PANTHER ACID PHOSPHATASE RELATED 22 394 IPR039331 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01786 Gma-Chr3 43972908 43987624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01786 49 416 Miscellaneous Gene Families AT1G13900 25.734 1.75e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01786 K22390 - gmx:100794764 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01786 03 43972908 43987624 Gma03g01786 03 43972908 43987624 ECH
Gma19g01829 19 47564089 47567400 Gma03g01786 03 43972908 43987624 GST