Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01784 ATGATTGCTGAATCAAACATGAGACCCAACTTCCATTTTTGCTATGCCTTTCTTCTTATCCTTGTCCTTGGCCATCACACTTCTTCACAGAAGACTTGTACAAATTGTGGCTCTATGCAAGTTCCGTACCCTTTGAGCACAGATTCAACTTGTGGTGATCCACACTACAAGCTTCGTTGTGATCCCCACTCTCAAAGGCTTTTCTTCGACACCCTCAACGGAAGTTCCTATCTTGTTCTAAGAATCATGTCTTCAAACCAACGCATGGTGGTAGAGCCATCACCTTGGTTACCAGGTTCATGTGTCACACAAGACATGCCTAGAAGCAATGGTATATGGTTAAACCAGTCACTCCCTTTCAACATAACTTCATCCAACACAGTGTTCCTCTTTAACTGTTCCCCGCGCCTCTTGGTTTCTCCACTTAACTGCACTTCTTCTAGTATTTGCCATCGTTATTTGGAGAATTCAGGCCATGTTGACACAAAAAGAGCACTTGAGTGTGCAAATGATCTTCACCCTTGTTGCACTTTTCTAGCTGGAGGGATACCTTCAGCTTACAGAATCAGGCTTCATGATTCTGGCTGCAAAGCATTCAGAAGCATAATTCATTTGAACCAAGACAAGCCTCCGAATCAGTGGGAGGAAGGGCTTGAAATCCAATGGGCTCCTCCACCTGAACCAGTGTGCAAGACACAAAGGGATTGCTCTGAAGACTCTAAGTGTTCCCCTACAAGTAGAAATGGCCTATTTCGCTGTCTTTGTAATGGGGGACACATTTGGAACCCTTTTGAAGCAACCTGTGTCAGGTATGAGAGAAAATCCAAATGGAAAACCAGCTTGGTGGTCTCAATAGGGGTTGTTGTTACTTTTTTCTCTCTTGCTGTGGTTCTGACCATCATCACAAAGTCCTGCAAACTCTCTACCTATAAAGAGAATCAGGCCAAGGAAAGAGAAGATAAGCTGAAATCAAGTGCTGTGGAGAAGCCTTGCAGGATGTTTCAACTGAAAGAGGTGAAGAGAGCAACAAACGGTTTTTCCCACGAGAGGTTCTTGGGGAGTGGTGGCTTTGGGGAagttttcaaagagcttttgacatcacagaaagcgatTGACTTCAATCGTGATCAAGATGATGTCAACCTAGCCATTCATGTGAACCAACATGCCAGCAATGGTACAATCATGGAAGTGGTGGATCAAAGGCTTCTTATTTCCGTGGAGACCTTGTTGGGGGATAAAATGTTCACAAGCATAAAACTCTTCTTGGAGCTTGCACTTGAATGTCTAAGGGAGAAGAAAGGTGAAAGGCCTAATATGAGGGATATTGTTCAACGCTTACTATGCATAATTAGGATTGTAGAACAAGAGTGA 1374 0.4265 MIAESNMRPNFHFCYAFLLILVLGHHTSSQKTCTNCGSMQVPYPLSTDSTCGDPHYKLRCDPHSQRLFFDTLNGSSYLVLRIMSSNQRMVVEPSPWLPGSCVTQDMPRSNGIWLNQSLPFNITSSNTVFLFNCSPRLLVSPLNCTSSSICHRYLENSGHVDTKRALECANDLHPCCTFLAGGIPSAYRIRLHDSGCKAFRSIIHLNQDKPPNQWEEGLEIQWAPPPEPVCKTQRDCSEDSKCSPTSRNGLFRCLCNGGHIWNPFEATCVRYERKSKWKTSLVVSIGVVVTFFSLAVVLTIITKSCKLSTYKENQAKEREDKLKSSAVEKPCRMFQLKEVKRATNGFSHERFLGSGGFGEVFKELLTSQKAIDFNRDQDDVNLAIHVNQHASNGTIMEVVDQRLLISVETLLGDKMFTSIKLFLELALECLREKKGERPNMRDIVQRLLCIIRIVEQE 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01784 457 Gene3D Phosphorylase Kinase; domain 1 306 395 - -
Gma19g01784 457 Pfam Wall-associated receptor kinase galacturonan-binding 33 91 IPR025287 GO:0030247
Gma19g01784 457 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 362 IPR045274 GO:0007166
Gma19g01784 457 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 360 457 IPR045274 GO:0007166
Gma19g01784 457 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 23 362 - -
Gma19g01784 457 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 360 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01784 Gma-Chr19 47109771 47111672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01784 357 457 Receptor kinase-like Gene Family AT5G02070 33.663 2.57e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01784 - - gmx:100804678 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01784 19 47109771 47111672 Gma19g01784 19 47109771 47111672 ECH
Gma19g01784 19 47109771 47111672 Gma03g01734 03 43451164 43453047 GST